Lotus japonicus: 130734064
Help
Entry
130734064 CDS
T04348
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
lja
Lotus japonicus
Pathway
lja04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
130734064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130734064
03029 Mitochondrial biogenesis [BR:
lja03029
]
130734064
Membrane trafficking [BR:
lja04131
]
Autophagy
Autophagosome formation proteins
ULK complex
130734064
Atg1 complex
130734064
Mitochondrial biogenesis [BR:
lja03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
130734064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
130734064
NCBI-ProteinID:
XP_057442341
LinkDB
All DBs
Position
1:20480345..20485450
Genome browser
AA seq
597 aa
AA seq
DB search
MDLQGGNMQPELGKLEQIVYQFLLKCLHIILDSRVPLLRPNDRSGDMSIGSHSRVKKSDK
WFNLALGDRPSALDNLHFWHRNLMDPMIIDIILVHEEISSSIETVIERWVVQYECPRVMA
PQTGDIIGAYKKAYQKSIVLFRALYSQMRLLPAYKIFRKLNTSSHTCNFDIIYKVSSFSD
PFSRAEEGLLEEYNFTPVEALPGRLSISVTYRTTLSDFNLECSISLPPKIITDYVGSPHT
DPLRSFPASQKGVCATSFPVRGLAPPSSAPLERPHSWTSGFHKTAPFVQNYPHVGSPPVY
HASPNPYDFPSSPNDNYNVRYHKYRIQNQQRSTSYDEHQLSPPFSPSPSPSPPTYLHGGN
LMHTRIRPETAPVTIPHPMMGKGSRNLSPNFSDPSRNSLPPLSPRRNDTSSSQESPSGVR
SFRKIETSKIGQKIVRDSKDDSGRFSGLLSSSGSPRIGFSRTSSKLSFQDDLDDGDFSCP
FDVDDVDPPDVLSSHNVDGKSASESPSTSLPMGRKSQDAAVGVLVHMLRTAPPLRQDPSC
YSSHSLKAEPGVGAATASGFFMPRKTADALEELRSYKEMRDLLLSKSGTRILKRDEA
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggatttgcagggtggtaatatgcagcctgaattgggtaaattggagcaaattgtttat
caatttcttttgaagtgcttacacatcattttggactcgagggtacctttgttacgccca
aatgatagaagtggtgacatgtcgattggttctcattctcgtgtgaagaagagtgacaaa
tggtttaacctggcattaggtgatcgaccttctgctctggataacttgcacttctggcac
aggaatttgatggatcctatgattattgacatcatactagttcatgaagagattagttcc
tctattgagacagttatagagaggtgggttgttcagtatgagtgtccccgagtaatggct
cctcagactggtgacattattggtgcttacaagaaggcataccagaagtctatagtactg
ttccgtgctctttattctcaaatgaggcttctgccggcttataagatatttaggaagcta
aatacatcaagtcatacttgtaattttgatattatttacaaggtatcttcctttagtgat
ccattttctcgggcagaagagggactgctggaagagtataatttcactcctgttgaggcc
cttccaggccgcctcagtatatctgtgacctaccgtactacactatctgatttcaacctt
gagtgttcaatatcattaccaccaaaaataattactgattatgttggaagtccccatact
gaccctttgagatctttccctgcctctcaaaagggtgtctgtgctacttcctttccagta
agagggttagctcctccatcttctgcaccacttgaacgacctcatagctggacgagtggc
ttccataaaacagcgccttttgtacagaactatccacatgttggatccccaccggtgtat
catgcttctcccaatccgtatgattttccatcatcacctaatgataattacaatgtcagg
tatcataaatatcgaatacaaaatcagcaaaggtctacaagttatgatgagcatcaactt
tctcctccattctcaccctcaccatctccatcaccacctacatacttacatggaggcaat
ctaatgcacacccgtatacgccctgaaacagcccccgtaactataccgcatccaatgatg
ggaaaaggctccagaaatctttctcctaatttttctgatccaagtagaaattctttgcct
cctttgtctcccagaaggaatgatacttcttcatcacaggagtctccatctggagtcaga
tcattcaggaaaatagaaacttcaaagattggccaaaagattgtcagagatagcaaggat
gattcagggcgtttctctgggttgttatcttcaagcggctcaccacgcattggattttca
aggacatcaagtaaattatcttttcaggatgacttggatgatggcgacttttcctgtcct
tttgatgttgatgatgttgacccaccagatgttctgtccagtcataatgtggatgggaag
agcgcttcagagtccccttcaacatcattaccaatggggagaaaatcacaagatgctgct
gttggcgttcttgtgcacatgcttaggacagcgcctcctttgcgccaagatccaagttgt
tattcatcccattccctaaaggctgaacctggggtaggagctgctactgcttctggattc
ttcatgcctcgaaagacggctgatgcacttgaagagctcaggagttacaaagaaatgaga
gaccttcttctatctaagagcgggactcgcattctgaaaagagatgaagcttaa
DBGET
integrated database retrieval system
