Lotus japonicus: 130734326
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Entry
130734326 CDS
T04348
Name
(RefSeq) uncharacterized protein LOC130734326 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
lja
Lotus japonicus
Pathway
lja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130734326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lja03032
]
130734326
03400 DNA repair and recombination proteins [BR:
lja03400
]
130734326
DNA replication proteins [BR:
lja03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
130734326
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
130734326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
LIG3_BRCT
ECT2_BRCT0
TopBP1_BRCT0
NIBRIN_BRCT_II
Motif
Other DBs
NCBI-GeneID:
130734326
NCBI-ProteinID:
XP_057442667
LinkDB
All DBs
Position
1:29157018..29168510
Genome browser
AA seq
980 aa
AA seq
DB search
MSKPKPFHGANVFMSRNLVPPEVFDALHDAVKNNGAEIHLCCDPSRNGASDYHIISCSKH
EKFDDLKSKGCKLLGPRCVLSCAREQRPLPKKGFTCCLAMEGVKLLASGFDADEKVKIEE
LVTEMGGILHTKASLDLNFIIVKNVLAAKYKWALNILKKPIVTYEWLKQCSDEHRVVPQE
SYKVLPFSGLRICVTGIPADKRKEMEKLILQNGGKYSAELTKNCTHLISNAPEGDKYKVA
KRWGHICIVTSKWFDQSIARRACLNEESYPVQSGSISSLKVTRDFTVQHSQERDFGNSQS
VATSRAMDSNMPVFSGAESMDLEAKQSEHMSSSLNAPLFVKEADPEAPPLHTSNELNFDG
AVANDSESDDNDLYLSDCRILLVGFEASEMRKLVNMVRKGGGSRYMSFNDKLTHIVVGNP
TEMEKKDVRSLAALGVIHVVKTSWLEDCDREKKEVTVLQRHIANDTLLPKASTAKGAVTR
ITSINQGKSSGFHQSLQTDQVVNIMESRVVVPECSKKSKEEKPDMGISALTSSKAKGKTM
SQNQPPDNKLKVQKMTQHDSSVLHVKTTNVFRGKTFCFSNLFPEERRAEVIQWISQGGGE
IISEKTRKSVHYTIECHGVTPRLKGDHEGCYISSHWIRSCLEDGSLLDVDSHILYSPLPC
CVPLPGFESFRFCVSQYEEKDRILLRNLCFVLGAKFVEKLTKKVTHLLCKFTNGPKYDAA
CKWGIRSVTSEWIFECVKQNRVVAIDQFLPKEVTAQDQEAGVCTVSQFPTQAVRMISDMP
SQFPSQSQSLGSAASKNVFCEVGNHGADYTASSTSSKRARHDKVPSAINSGTHVNDMNNT
EENLVKDAGEISHAVPDVASAIEDLLEQTSKIHDQRPPESTGCERSIYSSDCPVLGEDNS
NPHTTFGLSKHSLNRSFRKDDKGEASEDRRRAGIYDGFSETQTDSQVVSYEEDLSGRQML
IERVRIRSSMPSSTMKEDFS
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagccaaagccattccacggcgcgaacgtcttcatgtcgcggaacttggtgccg
ccggaagtcttcgacgcgcttcacgacgccgtcaaaaacaacggtgccgaaatccacctc
tgctgcgacccttcccgcaacggcgcctccgattaccacatcatttcctgcagcaaacat
gagaagttcgatgatcttaaatccaagggctgtaaattgctaggtcctagatgtgttctt
tcttgtgctagagaacaaaggccactgcctaaaaagggcttcacttgttgccttgctatg
gaaggagtcaaactacttgcctctggctttgatgccgacgaaaaggttaagatagaagag
ttagtgactgaaatggggggaattctacacacaaaagcgtcactggatttgaactttatc
attgtgaaaaatgttttagctgcaaagtacaagtgggctttgaatatcctgaagaagcca
atagttacttatgaatggttaaagcaatgctcagatgagcatcgtgttgttcctcaagag
tcatacaaggtccttcctttctccgggttaaggatttgtgtaactggaatcccagcagat
aagcgcaaagagatggaaaagcttattttacaaaatggtggaaaatactctgcggaactg
acaaagaattgcacacatttgatttctaatgctcctgaaggcgacaaatataaggtggct
aaacgttggggccacatctgtatagtgactagtaaatggttcgatcaatctattgctcga
agagcatgtctaaatgaggagtcttaccctgttcaaagtgggtctatatcttcacttaaa
gtaactagggacttcacagtgcaacatagccaagagagggattttgggaactcacaatct
gtggcaacctcaagagctatggattcaaatatgccagtcttttctggtgctgagtctatg
gatctagaagctaaacagtcagaacatatgtcctcttctttaaatgctcctttatttgtt
aaagaggcagatcctgaagcacctccattacataccagtaatgaattgaactttgatggt
gctgttgcgaatgattctgaatctgatgataatgacctgtacttatcagactgcagaata
ttacttgttggttttgaagcttctgaaatgcggaaattagttaatatggtgcgtaaaggt
ggaggatcccgatatatgtcttttaatgacaagctgacacacatagttgttgggaatcct
actgaaatggaaaagaaggatgtaaggagccttgctgctttgggtgtcattcatgttgtt
aaaacctcatggcttgaagattgtgaccgtgaaaagaaggaggtcactgttcttcagaga
cacatcgcaaatgatacacttcttcccaaagctagcacagcaaaaggagcagtaacacgg
atcacgtccattaatcaaggtaaaagctctggctttcatcaaagcttgcagactgatcag
gtagtgaatattatggaatctagagtagtagtgccagaatgttcaaagaaaagcaaagaa
gagaaaccagatatgggtataagtgctctcacatcaagtaaagcaaagggcaaaactatg
tcgcaaaatcaacctcctgataataaattgaaggtacaaaagatgacgcaacacgactct
agtgttctacacgtgaagacaacaaatgttttcagagggaaaacattttgtttctcaaat
ctatttcctgaagaaaggagagctgaggttattcaatggataagtcaagggggaggagag
ataataagtgagaaaacaagaaagagtgtccactatactattgagtgtcatggtgtaaca
cccaggttgaaaggtgatcatgaaggttgctatatttccagtcactggatacgatcttgt
ttggaggatggatccttgctggatgttgatagtcacattctttattctccacttccctgc
tgtgttccgttgcctgggtttgaaagcttccgattttgtgtttcacaatatgaggagaaa
gacagaattcttcttaggaacttgtgttttgttctaggagctaaatttgtggagaagttg
actaagaaggtcacccatttattatgtaaattcaccaatgggcccaagtacgacgctgct
tgtaagtgggggatccgatcagttacatctgaatggatatttgaatgtgtgaaacagaat
agagttgttgccatcgaccaatttttacccaaggaagtcactgctcaagaccaagaggca
ggagtttgcactgtgagtcaatttcctacccaggctgttcgaatgataagtgacatgccc
tcccagtttccaagtcagtctcaaagtttgggaagtgcagcgagtaaaaatgtattttgt
gaagttgggaatcatggggctgattatacagcatcaagtacttctagcaaaagggctagg
catgataaggtgccttctgctataaattcaggtactcatgtcaatgacatgaacaatact
gaagaaaatttggttaaagatgcaggggagatttctcatgctgttcctgatgttgcttct
gcaattgaggacttgttagagcagacaagtaagatacatgatcagaggcctccagagagt
actgggtgtgaacgaagtatatactcatctgattgtccagtccttggtgaagacaattca
aatcctcatactacctttgggttatctaaacactcgctaaacagaagtttcagaaaagat
gacaagggtgaggcatctgaagacagaagaagagcaggaatatatgatggctttagtgaa
acacaaacagactctcaggttgttagttatgaagaagatttgtcaggaaggcaaatgctt
atagagagagtccgaattcgaagtagcatgccctcaagtaccatgaaggaagatttcagt
tga
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