Lotus japonicus: 130734465
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Entry
130734465 CDS
T04348
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
lja
Lotus japonicus
Pathway
lja03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130734465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130734465
03036 Chromosome and associated proteins [BR:
lja03036
]
130734465
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130734465
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130734465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
130734465
NCBI-ProteinID:
XP_057442886
LinkDB
All DBs
Position
1:33567050..33577585
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AA seq
711 aa
AA seq
DB search
MPSDTVGNGVLVPFSGEGSDSVAVYPLNHGLSLPISRVAISWSRGNSLRVSLFAEPSATS
PDSQASGAKVVEVKLSGEDPEISDSNWRRIAYGSVTPFALLQSRRSSLAALSKSPSPYHV
DWWEHVLEYSKDIASLLGGPKLSPGPIIEDPNAIATKCEEPTCLKAAWELLEMFYVDKRS
QAWLPERLVDWLADFDSLFTSTHETIHGKLVNFQKELVNIQVIEDDPRYWEVMSSALSVG
WLDIVVKMLRLHGSYQLDQLSSRERENGLVEVVAVLISKMPRLRPESAVENLGECFKSKP
DFIKAWEKWRSQITKLDCSPFWIQCDNQQTCDGLRNLLQIMLGNTESLCTATCHWIELYV
SHFLYIRPFTTGIESMYNLAQKCMQLKPPSSIHKLTGLMIGILGENTEVVLAECSREFGP
WMVAHAVELLTAGSEQAEVLLHDEHYNLGGISIVELHRLAYAQVLSSHALTWQIAPIYLT
SCMKQGMGLLENLLYRQSVQHNDTLLKNIEICRLYELDHISSKIMKVAGVFHWKHGRKGA
GVFWLQQAQDASCLGRIALQLFDAVGKSISDESFKQWEGIIELLGSESKPAGGLEFLHKY
RDFKKSLQQVSGGKSTEAARQAVGSLILLMKNPSTPPRFWLPLLYDSLKLLNWKDCSLLT
ESETNLLLNKLQELSLARLRPHFTEPSLPPEALSSVRLALATNLGRAILDE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgccctccgacacagtcggcaatggcgtcctggtcccattctccggcgagggcagtgac
tccgtcgcggtttaccctctcaaccatggcctctcccttccaatttctcgcgtcgccatc
tcctggtcccgcggcaactccctccgcgtctcccttttcgccgaaccttctgcaaccagt
cccgactcccaagcatccggcgccaaggtcgtcgaagttaaactcagcggcgaagatccg
gagatctccgactctaattggcggcgaatcgcctacggctccgtcacgcccttcgcgctg
cttcagagtcgccggagctctcttgccgctttgtcaaagtctccctcgccgtatcatgta
gattggtgggagcatgtgcttgagtatagtaaggatatagcttcacttcttggggggcca
aagttatctcccggtccgataatcgaagaccccaacgcaattgccacgaaatgtgaggag
ccgacatgcttgaaagctgcatgggagttgctggaaatgttttatgtggacaagcgatct
caagcatggctacctgaaaggcttgttgattggttagctgatttcgacagcctctttact
agtacacatgaaaccattcatggcaaacttgtcaattttcagaaagagcttgtcaatata
caggtgattgaggatgatcctagatattgggaagtgatgtcatctgcattgtcagttggt
tggcttgatattgtggtgaaaatgctgcgcttgcatggatcttatcaattagatcaactc
agcagccgcgagcgagagaatggacttgtggaggtagttgctgttcttatttcgaaaatg
ccccgcttgcgtcctgagtctgctgtagaaaatcttggagaatgctttaaatcaaaacct
gactttatcaaggcctgggaaaaatggaggtctcaaattacgaaactagactgcagtcca
ttctggattcaatgtgataatcaacagacatgtgatggtttgagaaacttgctgcaaatt
atgctgggtaacactgagagtctctgcactgctacatgtcattggattgagttgtatgtt
tctcattttctgtacatcaggccattcacaacaggaatagaaagcatgtataatttggcc
caaaaatgcatgcaattgaaaccaccatccagtatccataagttgacaggacttatgatt
ggcattcttggagaaaacactgaggtagttttagcagaatgttccagagaatttggtcct
tggatggttgcacacgctgtagaattgttgactgcagggagtgagcaagcagaggttctt
ctacatgatgagcattataacttggggggtatcagtatagtggaactgcatcggcttgca
tatgctcaagttctatcatcacatgcattgacctggcaaatagctccaatatatttaact
tcgtgcatgaagcaaggaatgggcttgttagagaatttattatatcgacaatctgtccaa
cacaatgacacgctgcttaagaacattgagatttgccgtttgtacgagcttgatcatatc
agttcaaagatcatgaaggttgctggagtatttcactggaagcatggtcgtaaaggtgca
ggagtattttggcttcaacaagcccaagatgcaagttgtctcggtaggattgccctgcag
ttatttgatgctgttggaaagtcaatttctgatgaaagcttcaagcaatgggaaggcata
attgaattattgggttctgaatctaagcctgcagggggtcttgaatttttacacaagtac
agggatttcaaaaaatcccttcagcaggtatctggtggaaaatctactgaggctgccaga
caagctgtaggctccctcatactgcttatgaaaaacccatcgaccccgccgcgcttttgg
ctgccacttctttatgactcgttgaagctgctcaattggaaagattgttctcttctcacc
gagtctgagaccaatcttctgctgaacaaacttcaagagttatctttggcgaggttgcgc
ccacatttcactgagccaagcttaccccctgaagcactaagctctgtcaggctggctcta
gctacaaatcttggtcgtgctatacttgatgaatag
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