Lotus japonicus: 130734531
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Entry
130734531 CDS
T04348
Name
(RefSeq) vacuolar protein sorting-associated protein 9A-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130734531
Membrane trafficking [BR:
lja04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
130734531
Protein recycling
Other Rab GTPase associated proteins
130734531
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Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
DUF4688
Motif
Other DBs
NCBI-GeneID:
130734531
NCBI-ProteinID:
XP_057442973
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All DBs
Position
1:60023865..60028704
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AA seq
468 aa
AA seq
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MENADVFLGLHDFLERMRQPAAADFVKAIKSFIVSFSNNAPDPDRDSAAVQEFLANMEAA
FKAHPLWAGCSEEELESAGEGLEKYVMTKLFSRVFASLPNDVKFDDQISEKMGLIQQFIR
PENLDIMPAFQNETSWLLAQKELQKINMYKAPRDKLICILNCCKVIGNLLLNASLASKEN
PPGADEFLPVLIYVTIKANPPQLHSNLQYIQRFRRQTRLAGEAAYYFTNMLSAESFISNI
DAKAISMDETEFERNMEFSRALLSGLSVDTQDPNSPYQNYGQHPRAEPAKHRNKALNDNK
DPTLRTPSSVAKSESKRVSFSDELLITKVPSLSDLENKGASMILKEDKLNEIFGEFPYLF
ASVGDLTVGDVEDLLNNYKQLVFKYVSLSKGLGVSSTSNSQNNTQDHVESETTLDSSEGE
SVGAIDEPEKSIDTMEDSSEKVSPLEEAKSESDLPQEEAVAPEAAAPS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgccgacgttttcctcggcttacacgacttcctcgagcggatgcggcaaccc
gccgccgccgatttcgtcaaagcaatcaaaagtttcatcgtttcgttttcgaacaatgct
cctgatcctgatagggacagtgccgcggttcaagagtttcttgctaacatggaagccgct
ttcaaggctcatccactttgggctggttgctctgaagaggagctcgagagtgccggtgaa
gggcttgagaagtatgtcatgacaaagttattttcccgcgtatttgcttcacttccaaat
gatgtaaaatttgatgatcaaatttcagagaagatggggttgattcaacagtttatccgc
ccagaaaatttggatatcatgccagcatttcagaatgaaacttcatggttgcttgctcag
aaagaattacagaagatcaacatgtacaaggcgccaagagacaaacttatctgtatcctg
aattgttgcaaggttattggaaacttgctgcttaatgcttctcttgcttcgaaagagaat
cctccaggagctgatgaatttcttcctgtgctaatttatgttaccataaaggcaaaccct
ccacaactgcactcaaatctacagtacattcaaaggtttagacgccaaactcgattggct
ggggaagcggcatattattttacaaacatgctctctgctgagtccttcatttcaaacata
gatgcaaaagccatttcaatggatgaaactgagtttgagagaaacatggaattttcccgt
gctcttctttctgggctttcagttgatacacaagatcccaattcaccctatcaaaattat
gggcagcatccaagagcagaacctgctaaacatagaaataaagctctgaatgataataag
gaccctacattacgaactccttcatctgtggcaaaatcagaaagcaagagagtgagtttt
tcagatgagttattgatcacaaaagttccatccctctcagatttggagaacaaaggggca
agtatgattttgaaggaggataagttaaatgaaattttcggggagtttccatatttgttt
gctagtgtaggtgacttaacagttggtgatgttgaagacctgctaaataattacaaacaa
cttgttttcaagtatgtatccctttccaaagggttaggtgtctcttctacatccaattct
cagaataatactcaggaccatgttgaaagtgaaaccacactagattcatctgaaggtgaa
tctgttggtgccattgatgaacctgagaagtctattgatacaatggaggatagttcagag
aaagtttcacctcttgaggaggcaaaaagtgagtcggatctgccacaggaggaggcagtt
gcacccgaggccgctgccccctcttaa
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