Lotus japonicus: 130734537
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Entry
130734537 CDS
T04348
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 16
KO
K05391
cyclic nucleotide gated channel, plant
Organism
lja
Lotus japonicus
Pathway
lja04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
130734537
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lja04040
]
130734537
Ion channels [BR:
lja04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
130734537
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
130734537
NCBI-ProteinID:
XP_057442981
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Position
1:complement(35507421..35511924)
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AA seq
688 aa
AA seq
DB search
MMHPDLHRFGVSSHFRSHFPASFSLRKKVPWWYQILDPRSKFVAQWNRTFLYSCIAALFL
DPLYFYFPITGDKACMQTDLVLGVFVTFSRTVADLFFFFHIVLKFRTAFVSPKDRVYGHK
ELVTDPYQIASRYFKSDFVVDFLATLPLPQIVVWFVIPAIKDSTVAHVNHTLSLIVLIQY
IPRLFQIFPLQRRILKTSGLIAKTALAGALYNLGFYMLASHILGASWYVASIQRQFECWR
ITCRKEMNRTHSPSCNPLFLDCASMTNPERQAWFRHTKVLTDCDALNNKNHFQFGMFADA
FTDHVSSSRFFQKYFYCLWWGLKNLSSYGQNIQTSTYSAETLFSSFICIAGLILFAHLIG
NMQNYLQSSTARLEEWRLRQKDTEEWMNHRQLPQELQERVRRFVQYKWLATRGVDEEAIL
RSLPVDLRREIQRHLCLDIVRRVPFFGQMDDQLLDAICERLVSSLNTKDSHIVREGDPVR
EMLFIIRGQVESSTTDGGRSGFFNSITLKPGDFCGEELLTWALVPASSLNLPSSTRTVKT
LTEVEAFALRAEDLKYVSNQFKRLHSKRLQHAFRYYSHQWRAWGSCFIQAAWRRHRKRQL
TMELMEKENLYYSNVMELEDDEENGAEEGLVGDNASHGQNLGATVLASKFAKKTKGAVKR
IPIPESSSLKMPKMFKPTEPDFSRFHDD
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacccagacctccaccgtttcggcgtctcatcccatttccgaagccacttcccc
gcctcattctccctccgtaagaaggttccatggtggtaccaaatcctcgaccctcggtcc
aaattcgtcgcacaatggaaccgcacgttcctctactcttgcatcgccgctttgttcctc
gaccctctctatttctatttccctatcaccggcgataaggcttgcatgcaaaccgatttg
gtcctcggcgtcttcgtcacgttctctcgcaccgtcgctgatttgttcttcttttttcac
attgttctcaagtttcgcaccgcattcgtttcccctaaagatcgtgtttatggccacaag
gaacttgttactgatccctaccaaattgcgtcgcgctacttcaagtctgatttcgtcgtt
gatttcctcgccacacttcctcttccacagatagtggtttggtttgtgattccggcaatt
aaagattcaacggtggctcatgtaaaccacaccttgtctctgattgtactcattcagtac
attcctcggctgtttcaaatttttcccctgcaacggcgaatcttgaagactagcgggctt
atagccaaaactgccttggcaggggcgttgtacaatcttggtttctatatgttggccagt
catattttaggagcttcctggtatgttgcttccattcagcgccaatttgagtgctggaga
ataacttgcaggaaggagatgaatagaacacactctccatcttgtaatcctttgtttcta
gattgtgctagcatgaccaaccctgagcgccaagcttggtttagacacactaaagtcctt
actgattgtgatgccctcaataataaaaaccactttcagtttggaatgtttgctgatgct
tttacagatcatgtctcttcctcaagattcttccagaaatatttttattgtctctggtgg
ggtttgaaaaatctaagttcatatggacaaaatattcaaacaagtacttacagtgctgaa
acgttattttcaagtttcatatgcattgcgggccttatcctatttgcgcatctcattggt
aacatgcagaattatctacaatcttcaacagcaagacttgaggagtggaggcttagacaa
aaggatacagaagagtggatgaatcatcggcaacttccacaagaactgcaagaacgtgtt
cgcaggtttgttcaatataaatggctagccactagaggtgtggatgaagaagctatttta
cgctctttgcccgtagaccttcggcgcgagattcagaggcatctttgtcttgatattgtc
cgacgagttcctttttttggccaaatggatgatcagcttctagatgctatatgcgaacgt
cttgtttcatcccttaacacaaaagactcacacattgttcgagaaggtgatccagtaaga
gaaatgcttttcatcattagaggacaagtagagagctccacaactgacggtggtagatca
ggattcttcaactccatcaccctcaaacccggtgacttctgtggtgaagaattgctaacg
tgggctcttgtgccagcctcgagtcttaaccttccatcttcgactcgaacggtgaagact
ctcactgaagttgaagcatttgcactcagagcagaggacctcaaatatgtctcaaaccag
tttaagcgcctccacagcaagagactccaacatgctttccggtactattcccaccagtgg
agagcttgggggtcttgctttatacaagctgcttggaggcgtcatcgcaagagacaattg
acaatggagttgatggagaaagaaaacttgtattattcaaatgtgatggagctagaagat
gatgaagaaaatggtgcagaagaaggtttagttggggacaatgcaagccatggtcaaaat
cttggggctacagttttggcttcaaaatttgctaagaaaactaaaggggcggttaagaga
atacccatccctgagagtagcagtttaaagatgcccaagatgttcaagccaacagagcct
gatttctcaagattccatgatgattag
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