Lotus japonicus: 130736383
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Entry
130736383 CDS
T04348
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II-like
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lja03041
]
130736383
Spliceosome [BR:
lja03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
130736383
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GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
130736383
NCBI-ProteinID:
XP_057444203
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Position
1:complement(61747471..61769021)
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AA seq
566 aa
AA seq
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MTIETLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGHLDHRRYPDFSLISSQAHYDAAL
SCIIITHFHLDHVGALAYFTEVCGYRGPIYMTYPTKALAPLMLEDYRKVMVDRRGEEELF
TSENIAECMKKVIAIDLRQTVQVDEDLQIRAYYAGHVIGAAMFYAKVGDAEMVYTGDYNM
TADRHLGAAQIDRLRLDLLITESTYATTIRDSKYAREREFLKAVHKCVSGGGKVLIPTFA
LGRAQELCILLDDYWERMNLKVPIYFSAGLTIQANMYYKMLISWTSQKIKDTYSTHNAFD
FKNVHHFERSMINAPGPCVLFATPGMISGGFSLEVFKHWAPSENNLITLPGYCVAGTVGH
RLMSGKATKVDVDPDTQIDVRCQIHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM
ALLKEKIHSELGIPCHDPANHETICISSTPYVKTEASRTFIQNCLNPNFKFQKCSSVDEC
DSTLTEKNLMPELQVKNCLNPNFKFQKCSSVDECDSTLTEKNLMPELQVKDERVAEGVLV
MEKTKKAKIVHQDELLLMLGEKKQGV
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgactatcgaaactctagttcttggtgctggtcaagaggtagggaagagttgcgtggtg
gtgaccatcaacggaaagcgaatcatgttcgattgcggaatgcacatgggccacttggac
caccgtcgataccctgatttctctctcatctcctctcaagcccattacgacgctgcactc
tcctgcatcatcatcactcactttcacttggaccatgttggagcattggcttacttcacc
gaagtttgcgggtatcgcggtcctatttacatgacgtacccaactaaagctctagctcct
ttgatgttggaagactatcggaaggtaatggttgatcgtcggggtgaggaagagctattc
acttcagaaaatattgcagagtgcatgaagaaagttattgctatagatctgaggcagact
gtgcaagtagatgaagacctgcagatacgtgcatattatgcaggacatgttattggagct
gcaatgttctatgcaaaagttggagatgcagaaatggtttatacaggagactacaatatg
acagcagatagacacctcggagcagctcaaatcgatagattacggcttgaccttcttata
actgaatccacgtatgcgactacaatacgtgattcaaaatatgctcgtgagagggaattc
ctcaaagccgttcataaatgtgtttctggtggaggaaaggtgcttattccaacatttgct
ctcggtagagctcaggaattatgcattttgttggatgactactgggagcgcatgaatttg
aaggttcctatctatttctcagcaggtttaactattcaagctaatatgtattacaagatg
cttattagttggacaagccagaagattaaagatacatactctacacataatgcatttgat
tttaagaatgttcaccattttgaaaggtctatgataaatgctcctggtccttgtgttctc
tttgccactcctgggatgataagtggtggattttcacttgaagtttttaagcactgggca
ccgtcagaaaataaccttatcactttgcctgggtattgtgtagctgggacagtaggacat
agattaatgtcaggtaaggccaccaaagttgatgtggatcctgatacacaaatagacgtg
cgttgccagattcatcaattggcttttagtcctcacacagattctaaaggaataatggat
cttgtaaaatttctctccccaaaacatgttatattagtgcatggtgagaagcctaaaatg
gctttgcttaaagagaaaattcattctgagttggggattccgtgtcatgatcctgcaaat
catgaaaccatatgcatttcctccactccctacgtaaagacagaagcctctcgcactttc
attcaaaactgcttgaacccgaacttcaaattccagaaatgcagttcagtggacgaatgt
gactctactttgacagaaaaaaacttaatgcctgaacttcaagttaaaaactgcttgaat
ccgaacttcaagttccagaaatgcagttcagtggatgaatgtgactctactttgacagaa
aaaaacctaatgcctgaacttcaagttaaagatgaaagagtagcagaaggagttctggtt
atggagaaaacaaaaaaggcaaagattgttcaccaggatgaacttctgctcatgttaggt
gaaaagaagcaaggggtttag
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