Lotus japonicus: 130737388
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Entry
130737388 CDS
T04348
Name
(RefSeq) tRNase Z TRZ1 isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lja03016
]
130737388
Enzymes [BR:
lja01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
130737388
Transfer RNA biogenesis [BR:
lja03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
130737388
Prokaryotic type
130737388
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Ortholog
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GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
130737388
NCBI-ProteinID:
XP_057445112
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All DBs
Position
2:complement(2121188..2126682)
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AA seq
300 aa
AA seq
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MEPGTDESNSAREIRGSHSSSKKAKDLNIEGYPVGGLSIGGHETCVIFPTLKVAFDIGRC
PPRAVSQDFLLISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPISVKEDVEKLFEVHRKM
DQSELKHNLIGLDVGEEFYLRKDLKVKAFRTYHVIPSQGYILYSVRQKLKPEYIGLSGNE
IKNLKSSGVEITYTLTEPEIAFTGDTTSEFIVDEKNTDALRAKVLVLECTFVNNSITVEH
AKDYGHTHLSEIISYADRLQNRAILLIHFSARYTVEEIQQAVCALPPPLAGRTFALTEGF
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggagcctggaactgacgagtcaaattcagccagagaaatacgaggctcacactcttct
tcaaagaaagcaaaagatctgaacattgaaggataccctgttgggggtttgtccattgga
ggccatgaaacatgcgtaatttttcccacacttaaagtagccttcgacattggtcgctgc
ccacctcgtgctgtttcccaagactttcttttgatctcacatgcccacatggatcacatt
ggaggactgccaatgtatgttgccacacgtggtttgtaccgtatgaagcccccaacaatt
attgtaccgatttcagtaaaagaggatgtagagaaactatttgaggttcacaggaaaatg
gaccaatcagagcttaaacacaacttgattggcttggatgtaggagaagaattttatttg
cgaaaggatcttaaagtaaaagcttttcggacttaccatgtaatacccagccagggttat
atactttactctgtaagacagaaacttaaaccagaatatatcggtctttctggaaacgaa
attaagaatttgaagtcatctggtgtggagataacatacactttgacagaaccagagatt
gctttcactggagacaccacgtcagaattcatagttgatgaaaagaacactgatgccttg
cgggctaaagttcttgtattggagtgcacatttgttaacaattcaattaccgtggaacat
gccaaagattatggacacactcacctttctgagattataagttatgctgataggttgcag
aacagagcaatccttttgattcacttttctgcgcgttacacagtagaggaaattcaacaa
gctgtgtgtgcattaccaccccctttagctggtcgaacttttgcacttactgaaggtttc
tga
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