Lotus japonicus: 130737407
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Entry
130737407 CDS
T04348
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic isoform X1
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lja03041
]
130737407
Spliceosome [BR:
lja03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130737407
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_long
PPR_3
PPR_1
Suf
HTH_36
Coat_F
Motif
Other DBs
NCBI-GeneID:
130737407
NCBI-ProteinID:
XP_057445150
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Position
2:complement(2832798..2837380)
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AA seq
789 aa
AA seq
DB search
MLFLGSIKPKYLLQLLHRENMVVRLTGQELLLPFQLPPLSRNTLSNPKFFHPIRSTVTIR
QFPRLSVSSAEQPAVLQEEEEELPEYEVFDFDAAAAEVEVKRLPPRPEVEVKELSELPEL
WRRSRVAWLCKELPVHKAGTLIRILNAQKKWMRQGDTTYVVMHCLRIRENETAFRVYKWM
MQRSWYQFDFALATTLADYMGKERKFSKCREVFDDIINQGRVPSESTFHILIVAYLSAPV
QGCLDEACSIYNRMIQLGGYQPRLSLHNSLFKALVSKPGVSSKDYLKQAEFIYHQLVTSG
LDVHKDIYGGLIWLHSYQDSIDKERIAALRQEMLRAGIKEGKEVLVSILRACARECEVEE
AEKTWSKLLPFESNPPSQAFVYKMEVYSKVGMPMKSLEIFREMQLKLGKISVAAYSKIIE
ILCKAQESEFAESIMTDFVKSGLKPLTPSYIDLLNMYSNLELHDKLEETFSQCLEKCRPN
CTLYNIYLDSLVKVGNLDKAEDIFYQMNRDVTIGVNARSCNAILRGYLSSDNHLKAEKIY
DFMCLKKYEIETSLMEKLDYILSLRRKFIKKPVSLKLSKEQREILIGLLLGGLQIDSDDQ
RKNHVICFNFDSDSISHHVLKSHLHRQFYEWLHPTCKPSDDSEDIPAKFCTIASSHFGFY
AEQFWSEGQPTIPKLVHRWLSPCVLAYWYMYGGRRSSSGDILLKIKGSREGVLSIVKKFK
AMSMDCKVKRKGKVFWIGILGSNSTWFWKLVEPYVLEDVKYFPETRDKMLEQDSVESQDN
INFNSDSYE
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgttatttttggggtcaataaagcccaagtatctcctccaattattacatagagagaac
atggtggtgagactcacaggccaagagcttcttcttccatttcaactccctcctctttct
cgcaacacactctcaaaccctaaattctttcatcccattcgttccaccgtcactatccgc
cagttcccgcgtctctccgtcagcagcgcggagcagccggctgttctgcaggaggaggag
gaggagctgccggagtacgaggttttcgatttcgacgcggcggcagcggaggttgaggtg
aagcgtctgccgccgcggccggaggtggaggtgaaggagctgagtgagttgccggagctg
tggcggaggtcgagggtggcgtggctatgcaaggagctgccggtgcacaaggcggggact
ctgatcaggatactgaacgcgcagaagaagtggatgaggcaaggagacaccacctatgtc
gtgatgcattgcttgcggattcgggagaatgagactgcgtttagggtatacaagtggatg
atgcaacgaagttggtatcaatttgattttgctcttgccactacgctcgcagattacatg
ggtaaagagcgaaagttttctaagtgccgtgaggtatttgatgatattatcaatcaaggc
cgtgttcctagcgagtcaactttccatatattgattgtagcttaccttagtgctcctgtt
caaggttgtttggatgaagcatgcagcatttacaaccgtatgattcagttgggtggttac
cagccccgtcttagcttgcataattccctcttcaaagctcttgtaagcaaaccaggggtc
tcttcaaaggattaccttaagcaagctgagtttatatatcatcaattggttacttctgga
cttgatgtgcataaggatatttacgggggtctaatttggctgcatagctatcaggactcc
atagataaagaacggatagcagcattgcggcaagagatgttacgtgctggaattaaggag
ggcaaagaggtgctggtatcgatcttgagggcttgtgcaagggagtgtgaggtggaggaa
gcagagaaaacttggtccaaacttcttccttttgaaagtaatcccccatcgcaagctttt
gtgtataaaatggaagtctactcaaaagttggcatgcctatgaagtccttggagatattt
agggaaatgcaattgaaactaggtaaaataagtgttgcagcctatagtaaaataatagag
atactatgcaaagcacaagaatcagagtttgcagaatcaatcatgacagattttgtcaag
agtggcctgaaaccccttacaccatcatacattgatttactaaacatgtactccaatttg
gaattacatgataaattggaagagacattctcccagtgcctggagaaatgtcgtcctaat
tgtactctctacaatatatatttggattctttggtaaaagttggtaatcttgacaaagca
gaggatatcttttaccaaatgaatcgggatgtgactattggtgtcaatgctcgatcgtgt
aacgcaatcttaagaggatacttgtcctcggacaatcacttaaaggcggagaagatctat
gactttatgtgcctaaagaagtatgaaattgaaacctcattgatggagaagcttgactat
atcttgagcttgagaagaaaatttattaaaaagcctgtgagcctcaagctaagcaaagaa
cagagggaaatcttaattggattgcttttaggtggcctgcagattgattctgatgaccaa
aggaagaatcacgttatctgttttaattttgatagcgattccatcagtcatcatgtcctg
aagagtcatttacatcgccagttttatgagtggctgcatcctacttgtaagccaagtgat
gacagtgaggacataccagctaagttttgcaccattgcaagctctcattttggcttttat
gcagaacagttttggtcagaaggtcaacctacaattccaaaactagtccataggtggctg
tcaccgtgtgttcttgcatactggtacatgtatgggggtcgacgaagttcgtccggtgat
attttactaaagataaagggaagtcgtgagggtgttctgagcattgtcaaaaagttcaaa
gcaatgtccatggattgtaaagtaaagaggaaaggaaaggtattttggattggtattctc
ggaagcaattcaacttggttctggaaattggttgagccatatgttttagaagacgtaaaa
tactttccagagacacgtgataagatgctggagcaggattcagtggaaagtcaagacaac
attaacttcaatagcgattcatacgaatga
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