Lotus japonicus: 130737718
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Entry
130737718 CDS
T04348
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II-like isoform X1
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lja03041
]
130737718
Spliceosome [BR:
lja03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
130737718
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
C2_DCK_4th
Motif
Other DBs
NCBI-GeneID:
130737718
NCBI-ProteinID:
XP_057445532
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Position
2:complement(18118700..18135343)
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AA seq
566 aa
AA seq
DB search
MAIETLVLGAGQEGGKSCVVVTINGKRIMFDCGMHMGLLDHRRYPDFSLISSQGHYDAAL
SCIIITHFHLDHVGALAYFTEVCGYRGPIYMTYPTKALAPLMLEDYRKVMVDRRGEEELF
TSENIAECIKKVIAIDLRQTVQVDEDLQIRAYYAGHVIGAAMFYAKVGDAEMVYTGDYNM
TADRHLEAAQIDRLRLDLLITESTYATTIRDSKYAREREFLKVVHKCVSGGGKVLIPTFA
LGRAQELCILLDDYWERMNLKVPIYFSAGLTIQANMYYKMLISWTSQKIKDTYSTHNAFD
FKNVHHFERSMINAPGSCVLFATPGMISGGFSLEVFKHWAPSENNLITLPGYCVAGTVGH
RLMSGKATKVDVDPETQIDVRCQIHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKI
ALLKEKIHSELGIPCHDPANHETICISSTPYVKTEASGTFIQNCLNPNFKFQKCSSVDEC
DSTLTEKNLMPELQVKNCLNPNFKFQKCSSVDECDSTLTEKNLMPELQVKDERVAEGVLV
MEKTKKAKIVHQDELLLMLGEKKQGV
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggctatcgaaactctagttcttggcgctggtcaagagggagggaagagttgcgtggtg
gtgaccatcaacgggaagcgaatcatgttcgattgcggaatgcacatgggcctcttggac
caccgtcgataccctgatttctctctcatctcctctcaaggccattacgacgctgcactc
tcctgcatcatcatcactcactttcacttggaccatgttggagcattggcttacttcacc
gaagtttgcgggtatcgcggtcctatttatatgacgtacccaactaaagctctagctcct
ttgatgttggaagactatcggaaggtaatggttgatcgtcggggtgaggaagagctattc
acttcagaaaatattgcagagtgcatcaagaaagttattgctatagatctgaggcagact
gtgcaagtagatgaagatctgcagatacgtgcatattatgcaggacatgttattggagcg
gcaatgttctatgcaaaagttggagatgcagaaatggtttatacaggagactacaatatg
acagcagatagacacctcgaagcagctcaaatcgatagattacggcttgaccttcttata
actgaatccacgtatgcgactacaatacgtgattcaaaatatgctcgtgagagggaattc
ctcaaagtcgttcataaatgtgtttctggtggaggaaaggtgcttattccaacatttgct
cttggtagagctcaggaattatgcattttgttggatgactactgggagcgcatgaatttg
aaggttcctatctatttctcagcaggtttaactattcaagctaatatgtactacaaaatg
cttattagttggacaagccagaagattaaagatacatactctacacataatgcatttgat
tttaagaatgttcaccattttgaaaggtctatgattaatgctcctggttcttgtgttctc
tttgccactcctgggatgataagtggtggattttcacttgaagtttttaagcactgggca
ccgtcagaaaataaccttatcactttgcctgggtattgtgtagctgggacagtaggacat
agattaatgtcaggtaaggccaccaaagttgatgtggatcctgagacacaaatagacgtg
cgttgccagattcatcaattggcttttagtcctcacacagattctaaaggaataatggat
cttgtaaaatttctctccccaaagcatgttatattagtgcatggtgagaagcctaaaatt
gctttgcttaaagagaaaattcattctgagttggggattccgtgtcatgatcctgcaaat
catgaaaccatatgcatttcctccactccctacgtaaagacagaagcctctggcactttc
attcaaaactgcttgaacccgaacttcaaattccagaaatgcagttcagtggacgaatgt
gactctactttgacagaaaaaaacttaatgcctgaacttcaagttaaaaactgcttgaat
ccgaacttcaagttccagaaatgcagttcagtggatgaatgtgactctactttgacagaa
aaaaacctaatgcctgaacttcaagttaaagatgaaagagtagcagaaggagttctggtt
atggagaaaacaaaaaaggcaaagattgttcaccaggatgaacttctgctcatgttaggt
gaaaagaagcaaggggtttag
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