Lotus japonicus: 130737774
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Entry
130737774 CDS
T04348
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lja
Lotus japonicus
Pathway
lja00040
Pentose and glucuronate interconversions
lja01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130737774
Enzymes [BR:
lja01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
130737774
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
130737774
NCBI-ProteinID:
XP_057445600
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Position
2:complement(21343090..21346483)
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AA seq
404 aa
AA seq
DB search
MTPLSCFLVLFSLSLLTPNFVSSSAVRDPELVVQEVQRSINASRRNLGYLSCGTGNPIDD
CWRCDPNWENNRQRLADCAIGFGKDALGGKNGQIYVVTDSGDDDPVNPRPGTLRYGAIQD
EPLWIIFKRDMVINLKQELLVNSFKTIDGRGASVHIAGGGCITIHYVSNIIIHGINIHDC
KPTGNTDIRDSPHHSGFWTVSDGDGISIFNSKHVWVDHCSLSNCRDGLIDAIHGSTAITI
SNNYMTHHDKVMLLGHSDSYTQDKDMQATIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
WEMYAIGGSANPTINSQGNRFLAPDNRFSKEVTKHEDAPDSEWKSWNWRSEGDLFLNGAF
FRSSGAGASSMYARASSLSARPSSLVGSITVTAGTLNCRKGSRC
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgactcctctttcatgcttccttgttcttttctccctttctcttctaacaccaaatttt
gtttcctcctctgcagttcgagatcctgagttggttgtccaagaagtacagagaagcatc
aacgcctcaagaagaaacttgggttatttatcatgtggaaccggtaatcccattgatgac
tgctggcgatgtgaccctaattgggagaacaaccggcaaaggctagcagattgcgccatt
gggtttggcaaggatgccttgggaggaaaaaatggtcaaatctacgtcgtcactgactcc
ggtgacgacgaccccgtgaacccgaggccagggacactgaggtacggcgccatacaagac
gagccactatggatcatctttaagagagacatggtgattaacttgaaacaagagcttcta
gtgaactccttcaagacaattgatggaaggggtgctagtgttcacattgctggtggggga
tgcattaccattcattatgtgagcaatatcatcatccatgggattaacatccatgattgc
aagcccactgggaacaccgatataagagattccccacaccattctgggttttggactgtg
tcagatggagatggtatttctatatttaactcaaagcatgtgtgggttgatcattgctct
ttatctaattgccgtgatggtctcattgatgccatccatggatccacggctatcactatc
tccaataactacatgacccatcatgacaaagtcatgcttttgggacacagtgactcttac
acacaagacaaggacatgcaggccactatagcctttaatcattttggtgaaggccttgtc
caaagaatgccaaggtgtagacatggatactttcatgtggtgaacaatgactacacacac
tgggaaatgtatgcaattggtgggagtgctaaccctactatcaacagccaggggaacagg
tttcttgcaccagataacaggttcagcaaagaggtaacaaagcatgaggatgcaccggat
agtgaatggaagagctggaactggagatcagaaggggacttgttcttgaatggagcattc
ttcaggtcatctggtgctggtgcttcttctatgtatgcaagggcatcaagtctcagtgca
agaccatcttctcttgttggctccatcactgtcactgctggtacactcaactgcaggaag
ggctctcgctgctga
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