KEGG   Lotus japonicus: 130737852
Entry
130737852         CDS       T04348                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
lja  Lotus japonicus
Pathway
lja03030  DNA replication
lja03410  Base excision repair
lja03420  Nucleotide excision repair
lja03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    130737852
   03410 Base excision repair
    130737852
   03420 Nucleotide excision repair
    130737852
   03430 Mismatch repair
    130737852
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lja03032]
    130737852
   03036 Chromosome and associated proteins [BR:lja03036]
    130737852
   03400 DNA repair and recombination proteins [BR:lja03400]
    130737852
DNA replication proteins [BR:lja03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    130737852
  DNA Replication Termination Factors
   ELG1-RFC complex
    130737852
Chromosome and associated proteins [BR:lja03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    130737852
DNA repair and recombination proteins [BR:lja03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     130737852
  Check point factors
   HRAD17(Rad24)-RFC complex
    130737852
SSDB
Motif
Pfam: Rep_fac_C AAA Rad17 DNA_pol3_delta2 RCF1-5-like_lid AAA_16 AAA_assoc_2 AAA_22 DNAX_ATPase_lid AAA_11 AAA_30 AAA_5 AAA_14 DUF815 RuvB_N ATPase_2 AAA_7 AAA_19 bpMoxR AAA_24 ResIII nSTAND3 AAA_3 AAA_25 TIP49 MCM AAA_28 Mg_chelatase
Other DBs
NCBI-GeneID: 130737852
NCBI-ProteinID: XP_057445694
LinkDB
Position
1:complement(63941537..63947229)
AA seq 372 aa
MAEAEAIHPMEIDGDDDLTYSARPDKGKSVLVAGNPPGGQKAIPWVEKYRPQSLDDVAAH
RDIVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYRNMILELNASDDRGI
GVVREQIQNFASTQSLSFGVKTSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALIC
NHVNKIIPALQSRCTRFRFAPLDAAHVSERLKHVIKAEGLDVQDSGLEALVRLSNGDMRK
ALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQFADSFKRIYEIKTRKGL
AVIDIVREVTMFVFKIKMPPSVRVQLMTDLADIEYRLSFGCNDKLQLGSVISSFTRARFA
LVEAANLLNPVH
NT seq 1119 nt   +upstreamnt  +downstreamnt
atggcggaggcggaggcgattcatcccatggaaatcgacggcgacgacgaccttacttac
tccgcgaggcccgacaagggcaaaagtgtcctcgtcgccggcaaccctcccggcggccaa
aaggcgatcccgtgggttgagaagtaccgtcctcagtccctcgacgacgtcgctgctcac
cgcgacattgtcgatactattgataggctgactactgagaacagattgccccatcttcta
ctgtatggccctcctggtacgggaaaaacatcaactatcctcgctgtggcgcgcaaactg
tatggcgcgcaataccgcaatatgattttggagctgaatgcttctgatgatagaggaatt
ggtgttgtacgggagcagattcaaaattttgctagcactcagagcttatcatttggtgtt
aagacctctgtaaaactggtcttgttagatgaagcggatgccatgacaaaggatgcccaa
tttgcattacgtagagtgattgagaaatatacaaaaagcactaggtttgcacttatatgt
aatcatgtaaacaagattattccagcactgcaatcaagatgcactcggtttcggtttgcc
cctcttgatgctgcccatgtcagtgaaagattgaaacatgttattaaggctgaagggctt
gatgttcaagacagtggcttagaagcccttgtacggcttagcaatggtgatatgagaaag
gctttgaatattcttcagtcaacacatatggcctctcagcagataacagaagaagctgtt
tacctgtgcactggaaatccattgcctaaagacattgagcaaatatcttactggcttcta
aatgaacaatttgcagatagctttaaaagaatatatgaaatcaagacgaggaaaggattg
gccgtgatagatattgtgagagaagtgacaatgtttgtttttaagattaagatgcctcca
tctgttcgagtgcagctgatgactgatttagcagacatagagtatagattaagttttggg
tgcaacgataaacttcagcttggatcagttatttcttcttttacacgtgctagatttgca
ctcgttgaagctgctaaccttctgaatccggtccattag

DBGET integrated database retrieval system