KEGG   Lotus japonicus: 130738047
Entry
130738047         CDS       T04348                                 
Name
(RefSeq) ras-related protein Rab7 isoform X1
  KO
K07897  Ras-related protein Rab-7A
Organism
lja  Lotus japonicus
Pathway
lja04142  Lysosome biogenesis
lja04144  Endocytosis
lja04145  Phagosome
lja04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:lja00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    130738047
   04145 Phagosome
    130738047
   04142 Lysosome biogenesis
    130738047
   04148 Efferocytosis
    130738047
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lja04131]
    130738047
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lja04147]
    130738047
   04031 GTP-binding proteins [BR:lja04031]
    130738047
Membrane trafficking [BR:lja04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    130738047
Exosome [BR:lja04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   130738047
  Exosomal proteins of other body fluids (saliva and urine)
   130738047
  Exosomal proteins of colorectal cancer cells
   130738047
  Exosomal proteins of bladder cancer cells
   130738047
GTP-binding proteins [BR:lja04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    130738047
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 Gtr1_RagA GTP_EFTU ATP_bind_1 RsgA_GTPase cobW AAA_16 Septin nSTAND3 AAA_7 AAA_22 PduV-EutP DAP3 NACHT AAA_24 NB-ARC NTPase_1 nSTAND1 Sigma54_activat ATPase_2 AAA_5 MCM AAA_14
Other DBs
NCBI-GeneID: 130738047
NCBI-ProteinID: XP_057445933
LinkDB
Position
2:complement(43238653..43245751)
AA seq 205 aa
MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPSDPRTFPF
ILLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDYNVDAAFLCIAKTALANE
HDQDIYFQAIPEAAPENEQKGGCQC
NT seq 618 nt   +upstreamnt  +downstreamnt
atgtcattgcgaaggcgaaccttgctcaaggtcatcgttctcggcgacagcggggttgga
aagacctcgttgatgaatcaatatgtgcataagaagtttagtcagcaatataaagccaca
attggtgctgattttgtcactaaagaactccaaattgatgacagacttgtcactctacaa
atatgggacactgcagggcaagagaggtttcaaagtcttggggttgcattttatagagga
gcagattgctgtgttctagtgtatgatgttaatgtcatgaagtcatttgatacccttgac
aactggcatgaggagtttctcaaacaggcaaacccttctgatccaaggacttttcccttc
atattgcttggaaacaaaattgatattgatggcgggaatagtagagtggtttctgagaag
aaagcaaaagactggtgtgcttcaaaagggaatattccctactttgagacatctgcaaaa
gaggactacaatgttgatgctgcattcctttgtattgccaagactgctctagccaatgag
catgaccaggacatatattttcaagctattccagaggcagctccagagaatgagcagaag
ggtggttgccaatgctga

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