Lotus japonicus: 130738142
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Entry
130738142 CDS
T04348
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3
KO
K14948
polypyrimidine tract-binding protein 2
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lja03041
]
130738142
Spliceosome [BR:
lja03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130738142
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
TGF_beta
DUF1797
Motif
Other DBs
NCBI-GeneID:
130738142
NCBI-ProteinID:
XP_057446037
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All DBs
Position
2:complement(47070561..47099157)
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AA seq
431 aa
AA seq
DB search
MAEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAVSALQF
YANVQPSIRGRNVYVQFSSHQELTTMDQTQAREDEPNRILLVTVHHMLYPITVDVLHQVF
SPNGYVEKIVTFQKSAGFQALIQFQSCQSAITARSTLQGRNIYDGCCQLDIQFSNLDELQ
VNFNNDRSRDFTNPNLPTEQKGRSSQPGYGDAGVGFSQMTNAAAIATAFGGGLPPGITGT
NDRCRVLVANLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHL
IKGAMLFGKRLEVNFSKHANITQGDDTHEYVNSNLNRFNRNAAKNYRYCCSPTKMIHLST
LPQDIAEEEIVSLLEEHGTIVNSKLFEMNGKKQALVQFETEEQATEALVCKHASPLSGSI
VRISFSQLQNI
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccttctaaggtcattcacgttcgaaatgtggggcatgagatatctgaaaat
gatttgcttcagctatttcagccttttggagtcataacaaagcttgtaatgttgcgtgcc
aaaaatcaggcacttctccaaatgcaagatgttccttccgcagttagtgctttacaattt
tatgcaaatgttcagccaagcataagggggagaaatgtttatgtccagttttcctcacat
caagaactaactacaatggatcagactcaagcacgagaagatgagccaaatcgaattctc
ttggttacagttcatcacatgctgtatcctataacagtggatgtactacatcaagtgttt
tctcccaatggatatgtggaaaagattgtaacgtttcagaagtcagctggctttcaggct
ctcatccaatttcaatcctgtcaaagtgctattactgccagaagtacacttcagggacgc
aatatttatgatggttgctgtcagctggacattcaattctcaaaccttgatgagttacaa
gtgaacttcaataatgatcggtcaagggacttcacaaacccaaatctgcctacagagcag
aaaggccgatcttcacaacctggatatggtgatgcaggagttggattctcacagatgaca
aatgctgctgcaattgcaactgcctttggaggaggtttgcctcctggaataactggaaca
aatgacagatgcagagttcttgtggcaaatctcaaccctgatagaattgacgaggacaaa
ctgttcaacttgttctccatttatgggaacattgtcagaattaaacttctccgaaataaa
ccagatcatgcacttgtccagatgggggatggtttccaagctgagttggcagtacacttg
ataaagggagccatgttgtttgggaagcgattggaagttaacttctcgaagcatgcaaac
ataacccaaggtgatgatacacatgagtatgtgaattcaaatctcaaccgattcaatcgc
aatgctgctaaaaactatcggtactgctgctcaccgacaaagatgatccacttgtccacc
ctcccgcaagacattgccgaagaagagattgttagccttttggaggagcatggaaccatt
gtcaacagcaagttatttgagatgaatggtaaaaagcaggctcttgttcagtttgagact
gaggagcaagctactgaggcccttgtgtgcaagcatgcaagccccctttctggctcgata
gtccgcatctccttttcccagttgcagaatatatga
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