Lotus japonicus: 130738305
Help
Entry
130738305 CDS
T04348
Name
(RefSeq) E3 ubiquitin-protein ligase XBAT33-like isoform X1
KO
K19044
E3 ubiquitin-protein ligase XBAT32/33 [EC:
2.3.2.27
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lja04121
]
130738305
Enzymes [BR:
lja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130738305
Ubiquitin system [BR:
lja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130738305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
RING_XB3-XBAT31
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
130738305
NCBI-ProteinID:
XP_057446259
LinkDB
All DBs
Position
2:complement(52723847..52731457)
Genome browser
AA seq
599 aa
AA seq
DB search
MHAEEEKNKRASKSNSFTLFLFLAFPFCSLRTTITHVSSFKSSTFVFYPSHCLTHRKSCH
VTITPNPKSKPNQRAFHFSSHHKLIFALNTHTESLREMGNSFGCSASGERLVSAARDGDL
VEAKMLLECNPGLAKYSTFGGLNSPLHFAASKGHNEIVALLLENGADVNSRNYCGQTALM
QACRYGHWEVVQTLLLFRCNVMKADYLSGRTALHFAAVNGHVRCIRLVVADFVPSAPFEA
LHSRTDPNMSRHEHGALSKFVNKTADAGITALHMAALNGYFDCVQLLLDLNANVSAATYH
YGTSMDLIGAGSTPLHYAACGGNLKCCQILLSRGASRMALNCNGWLSLDVARMWGRHWLE
PLLSPTSDVIISSFPASNYLSLPLMSVLNIARECGLQSSTTSSNEIDFCAVCLERPCSVA
AEGCGHELCVRCALYLCSTANVSSEMQGPPGSIPCPLCRHGIISFVKLPGSQAKENKLHA
SLSLCTPCIQHPRRDLDPQSHTPEIRRNRVASVSSEMLCPVTCTPFPSVAIPLCTCNDGP
CPSCEPRDIETQDESPRHSQETDQDKMEGTRLGKTTCSNMFWGRRSCSREHQCNSEINA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcagaagaagaaaagaacaaaagagcaagtaaaagcaattcattcacactgttc
ttgtttttggcctttcccttttgttctcttcggacaaccattacccacgtttcaagcttc
aagtcttcaacctttgtcttctacccatctcactgtctcacacacagaaagagctgccac
gtcaccatcacaccgaatccaaaaagcaaaccaaaccaaagagcttttcatttttcttca
catcataaattaatatttgctctcaacacacacacagagagtttgagagagatgggaaat
tcatttgggtgctcagcttccggcgagaggctggtgtcggcggcgagggacggcgatttg
gtggaggccaagatgcttttggaatgcaaccctggtcttgccaagtactcaacctttggt
ggcctcaattcccctcttcattttgcagcttccaagggccataacgagattgtggcgctg
ttacttgagaatggagctgatgtgaattcaagaaattattgtgggcagacggctttgatg
caagcttgcagatatggtcattgggaagttgtacagacccttctgctctttagatgcaat
gttatgaaagcagattatctcagcggaaggacagctcttcattttgcagctgtcaatggg
catgtaagatgcattagacttgttgtggctgactttgttccaagtgcgccttttgaagct
ttacactctcgcacggatcctaacatgagcagacatgagcatggtgccctgtccaagttt
gtaaataaaacagctgatgctggtattactgctcttcatatggctgcactaaatgggtat
tttgattgcgtacaactcctacttgatcttaatgcaaatgtgtcagctgcaacatatcat
tatggaacttcgatggatttaataggggctggaagcactccattgcactatgctgcttgt
ggggggaatttgaaatgctgtcagatcctcctttcaagaggtgcgagtcggatggctttg
aattgcaatgggtggctttcacttgatgttgctaggatgtgggggcgtcattggcttgaa
ccgttgctgtcacccacttctgatgtcataatatcatcattccctgcttcaaattatttg
tccttgcctctcatgagtgtgctcaacatagccagagagtgtggattgcaatcatctaca
acctcctctaatgagattgacttttgtgctgtctgtctggagaggccatgttctgtggct
gcagaaggatgtgggcacgagctttgtgtaagatgtgcgctctatctttgctcaacagcc
aatgtttcttcagaaatgcagggccctcccggctctatcccttgtcccctttgtaggcat
ggaataatctcttttgtcaagttaccaggttcccaagcaaaagaaaataagttacatgcg
tctctcagcctgtgcaccccatgcatacaacatccacgacgcgacctagatccacaatct
catacaccagagattcgaagaaaccgtgtagcttctgtttcttctgagatgctttgccct
gtcacctgtactccatttccatctgtagcaattcctctatgcacctgcaatgatggtcct
tgtccgtcgtgcgaaccccgagacatagaaacacaagacgagtcgcctcgtcattcgcaa
gaaacagatcaggacaaaatggaagggacaaggctggggaaaacaacttgttcaaacatg
ttttggggtagaagaagttgcagcagggagcaccagtgcaattcagaaataaatgcctga
DBGET
integrated database retrieval system
