Lotus japonicus: 130738353
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Entry
130738353 CDS
T04348
Name
(RefSeq) ABC transporter B family member 28 isoform X1
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
lja
Lotus japonicus
Pathway
lja02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130738353
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lja02000
]
130738353
Transporters [BR:
lja02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
130738353
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_21
AAA_29
AAA_16
AAA_5
RsgA_GTPase
AAA_30
AAA_15
Zeta_toxin
AAA_28
AAA_23
AAA_25
Rad17
AAA_33
Motif
Other DBs
NCBI-GeneID:
130738353
NCBI-ProteinID:
XP_057446307
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All DBs
Position
2:54137136..54148108
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AA seq
708 aa
AA seq
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MAFTTVLWQCHPPPSPSSSPSSFRTLKPTLSFSLPRRHHQLCLSSRSSATTPPRAYVTGP
ASDPIVSDPDPKLDELPPEKPKPPNVITWELLSTLLMKHKLRLAVTAASLFACSACTLSM
PIFSGRFFEILIGARPEPLWRLLSKIGILYALEPLLTVIFVTNMNIVWEKVMSTLRAQIF
GRILIQKVEFFDKYKVGELTGLLTSDLGSLKAIVSENVSRDRGFRALSEVTGTMFILFYL
SPQLAPILGVLMLAVSISIAVYKRSTLPIFKAHGLAQASISDCVAETFSAIRTVRSFSGE
KRQMFTFANQVLSFQSSGIKLGTFKSVNESLTRVAVYISLIALYCLGGSKVKAGELSIGT
MASFIGYTFTLTFAVQGLVNTFGDLRGTFAAVERINSVLSGVQVDDALAYGLERELKQKA
LDDENYKLFFSDSPDEKNQRSYLHYMSALKTSSNVYSLAWSGDVCLEDVYFSYPLRPDVE
ILRGLNLRLKCGTVTALVGPSGAGKSTIVQLLSRFYEPAKGCITVAGEDVRTFDKSEWAR
AVSIVNQEPVLFSVSVGENIAYGLPDDDVSKDDVIKAAKAANAHDFIISLPQGYDTLVGE
RGGLLSGGQRQRIAIARALLKNAPILILDEATSALDTVSERLVQDALNHLMKGRTTLVIA
HRLSTVQNAYQIALCSDGRIAEQGTHFELLAKKGQYASLVGTQRLAFE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttacaacagtgttatggcagtgccaccctccaccttcaccttcttcttctcct
tcttctttcagaactctgaaaccaacactctcattctcacttccacgccgtcaccaccaa
ttgtgcctctcctctcgttcctcagccacaaccccgccgcgtgcctacgtcaccggaccc
gcatccgacccgattgtcagcgacccggacccgaagcttgacgagcttccaccggagaag
ccgaagccacccaacgtcattacatgggaactcctctccactctgctgatgaagcacaaa
ctccgcctcgctgtcactgctgcatctctctttgcctgctccgcctgtaccctatccatg
cccattttttctgggcgttttttcgaaattctcattggtgccagacctgagcctttatgg
aggctgctcagtaaaataggaatcctatatgccctggagccacttttgactgtaattttc
gttacaaatatgaacatagtatgggagaaagttatgtcaacgttgagagctcagatcttt
ggaagaatattgattcagaaggttgagttttttgacaaatacaaggtgggtgagctcaca
ggtttgttaacatctgatttgggttctcttaaagctattgtcagtgagaatgtttcaagg
gatcgtggattcagggcattatctgaggtcactggaacgatgttcatacttttttattta
tctcctcaattggcaccaattctgggtgttctgatgcttgcagtttccatttcaattgct
gtctacaagagatcaactttgcctatatttaaagcacatgggttggcccaagcttctatt
tctgattgtgtagcagaaacattttctgctattcgaacagtaaggtcctttagtggagaa
aagcggcaaatgtttacatttgcaaaccaggtcctatcttttcaatcaagcggaataaag
cttggaactttcaagtctgtaaatgaatccttaactagagttgctgtttatatttcttta
attgcattatattgtcttggaggaagcaaagttaaggcgggtgaactatctattggaact
atggcatcttttattggatatactttcactttaacattcgctgttcaaggactggttaat
acttttggagatctccgtggaacttttgctgctgttgagaggatcaattctgttttgtct
ggagttcaagttgatgatgcccttgcctacggcttggaaagagaactgaaacaaaaagca
ctggacgatgaaaactataagttgttcttctctgatagtcctgatgagaaaaaccaaaga
agttatttgcattacatgtcagcgctgaaaacatctagcaatgtgtatagcttagcttgg
tctggagatgtttgtcttgaagatgtgtatttctcttatcctttaaggccagatgtggaa
atcttacgtggcttaaatttaagactaaaatgtggaactgtaactgcactcgtgggtcct
agtggtgcaggcaagagtacaattgtacaactgttgtctcgattttatgagccagcaaaa
ggttgtataacagttgcaggagaggatgttcgaacatttgacaagagtgaatgggcccgg
gcagtctctatcgtaaatcaagagcctgttttgttttcggtgtctgttggagaaaatatt
gcatatgggcttccagatgatgatgtttctaaagatgatgtgattaaggcagcaaaagct
gcaaatgctcatgattttataatttcacttccacagggctatgacacacttgttggtgag
cgtggaggcctactgagtggaggccagaggcagagaattgctattgcccgagctctccta
aagaatgctcctattctcatactcgatgaggccacgagtgccttggatactgtaagtgag
cgcttggtacaggatgctctcaaccatttgatgaaggggaggacaacattagtgatagct
catcgattaagcacagttcaaaatgcctatcaaattgcactttgttctgatgggaggatt
gcagaacaaggcacccactttgagctattggctaagaagggccaatatgcttcactggtt
ggcactcaaaggcttgcatttgagtaa
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