KEGG   Lotus japonicus: 130738607
Entry
130738607         CDS       T04348                                 
Name
(RefSeq) SWI/SNF complex subunit SWI3C
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
lja  Lotus japonicus
Pathway
lja03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    130738607
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lja03021]
    130738607
   03036 Chromosome and associated proteins [BR:lja03036]
    130738607
Transcription machinery [BR:lja03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     130738607
Chromosome and associated proteins [BR:lja03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    130738607
   PBAF complex
    130738607
   GBAF(ncBAF) complex
    130738607
SSDB
Motif
Pfam: SWIRM-assoc_1 SWIRM Myb_DNA-binding Myb_DNA-bind_6
Other DBs
NCBI-GeneID: 130738607
NCBI-ProteinID: XP_057446659
LinkDB
Position
1:64650558..64664780
AA seq 792 aa
MPASPSENRTKWRKRKRDSQISRRKHHEDDDDDDEENPNAAEDDHHDYDDSEDHNHNHNH
PNSQPHHHEMEVLSDHPVQISVFPLVVKRTVNRPHSSVAAIVALERAIELGDSGSNSNKG
QVQNPTPLLENVSYGQLQALSAVPSDSSAFDQDRGDSSCVITPPPILEGRGVSKRFGNKA
LVLPMHSDWFSPATVHRLERQAVPHFFSGKSADHTPEKYMECRNCIVALYMEDLGKRITV
ADCQGLVVGVDQEDLARIVRFLDHWGIINYCARTPELPNAVSSLKEDTGGEVRVPSEALK
SIDSLIKFDNPKCKLKADEIYSSLTMHNADSPDLDDRIREHLSENHCNYCSRPLPVVYYQ
SQKEVDILLCTDCFHDGRFVIGHSSIDFMRVDSTRDYGELDWESWTDQETLLLLEAMEIY
NENWNEIAEHVGTKSKAQCILHFLRLPMEDGKLENINVPSMSLSSSVMNRDDNGRLHHHL
NGDSAGPIHQSRESDSRLPFANSGNPVMALVSFLASAVGPRVAASCAHAALAVLSEDGSG
STSQTEAPGHDNRTNAESVHARDGGPHGETANSINHNEDKAKMRSTRGQSEGRTTPLSAE
KVKDAAKAGLSAAAMKAKLFADHEEREIQRLCANIVNHQLKRLELKLKQFAEIETLLMKE
CEQVERAKQRFGAERSRIISAHFGTAGATPPMNASGVGPSVASNNGNNRQQIASPSQPSI
SGYGNSQPVHPHMSFAPRPSMFGLGQRLPLSMIQQSQSAASSTGMFNAPSNVQSSTNHPL
LRPVSGTNSGLG
NT seq 2379 nt   +upstreamnt  +downstreamnt
atgccagcttccccttcagaaaaccgaaccaaatggaggaagcggaagcgggactcccaa
atcagccgccggaagcaccacgaggacgacgacgacgacgacgaggaaaaccccaacgcg
gcggaggacgaccaccacgactacgacgactccgaggaccacaaccacaaccacaaccac
cctaattcccaaccgcaccaccacgagatggaggttctgtcagatcacccggtccagatt
tcggtgttcccgttggtggtgaagcgcaccgtcaaccgccctcactcctccgtcgccgca
atcgtggctcttgaacgagctattgagttgggagatagtggcagcaacagcaacaagggt
caggtgcagaaccctactccgttgctggagaatgtgtcatacggccagcttcaggcgctc
tccgccgtgccctctgatagctccgctttcgatcaggaccgcggtgattcctcttgtgtc
atcactccaccccctattttggaaggccgtggcgtttctaagcgctttggaaacaaggct
cttgtgctcccaatgcattcagattggttttcaccggccaccgtgcataggctagagaga
caggcggtgccccatttcttttctgggaaatcggcggatcatacgccagagaagtacatg
gaatgtaggaattgcattgttgcactgtacatggaggatctggggaagaggattactgtc
gctgactgccaaggattggtggttggggttgatcaagaagatctggctagaattgtccgg
tttcttgatcactggggaattatcaattactgtgctcggacgcctgagcttccgaatgct
gtgtccagcctgaaggaagacacgggtggagaggtccgtgtgccgtctgaggctttgaaa
tccattgatagtttgatcaaatttgacaatccgaagtgtaagctcaaagcagatgaaatt
tattcatcattgacaatgcataatgctgattcccctgatcttgacgacagaataagagag
catttgtctgaaaatcattgcaattattgctctcgtcctcttcctgtagtatactatcag
tctcaaaaagaggttgatattttactctgcactgattgctttcatgatgggagatttgtc
attggtcattcaagtatagattttatgagggtggattcaacaagagattatggtgaacta
gattgggaaagttggactgatcaagaaactttgttgctgcttgaagcaatggagatttac
aatgagaattggaatgaaattgcggagcatgttggtaccaagtcaaaagcacaatgcatt
cttcattttcttcgtctacccatggaggatggaaaattggaaaatatcaatgttccaagc
atgtctttatcatccagtgtcatgaatagagatgataatggaagattgcatcatcattta
aatggggattctgctggacccatccatcaaagccgagagtctgacagccgtctgcctttt
gcaaattctggaaatcctgttatggctctggtttcctttttagcctctgccgttggacca
agagtagctgcgtcttgtgctcatgcagcattagcagtattgtcagaggatggttctggc
agtacatcacagacagaagcaccaggacacgataataggacaaatgcagaaagcgttcat
gctagagatggtggccctcatggagaaactgcaaattcaattaatcataatgaggataag
gcaaaaatgcgtagtacacggggtcaaagtgaaggtcggacaaccccactctctgctgag
aaagttaaagatgcagctaaagcaggcctctctgcggcagcaatgaaagctaaattgttt
gctgatcacgaagaacgtgaaattcagaggttatgcgccaatatagttaatcatcagttg
aaaagactggaattgaagctgaaacagtttgcagaaattgaaacattactgatgaaagaa
tgtgaacaagtagaaagggcaaagcagaggtttggtgctgaacggtctcgcattatatcg
gcacattttggaactgcaggagccacacctccaatgaatgcatcaggtgttggtccttca
gtggctagtaataatggcaacaataggcaacaaattgcttctccctcacagcccagcatc
tcagggtatggcaacagccaaccggttcatccacatatgtcctttgccccgcgaccttca
atgtttgggttggggcaaagattgcccctgtctatgatacaacaatcacaatcagcagct
tcttcaactggcatgttcaatgctcctagtaatgtgcaatcgagtaccaatcacccattg
ttgaggcctgtgtcaggaactaactcaggtttaggttaa

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