Lotus japonicus: 130738744
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Entry
130738744 CDS
T04348
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1-like
KO
K12236
transcriptional repressor NF-X1
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lja03000
]
130738744
04121 Ubiquitin system [BR:
lja04121
]
130738744
Transcription factors [BR:
lja03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
130738744
Ubiquitin system [BR:
lja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
130738744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
RNA_bind
R3H
NCBP3
Adeno_L433K_22K
Motif
Other DBs
NCBI-GeneID:
130738744
NCBI-ProteinID:
XP_057446864
LinkDB
All DBs
Position
2:complement(62482930..62486959)
Genome browser
AA seq
1119 aa
AA seq
DB search
MSLQSRRERRDRPRVPSQAAAAAAPRQQWVPRGSAAGGGASSNNTVLPPQPSISIPHPYQ
NAVAAGSSDQGVAAAVAAAAPPAAAHRRNNQKVERERERERDRGKSRNQPGREVGLRDTS
LPQLVQEIQEKLMRGTVECMICYDMVGRSAAIWSCSSCYSIFHLSCIKKWARAPTSVDLT
ADKDQGFNWRCPGCQYVQRTSHREIRYVCFCGKRPDPPSDLYLTPHSCGEPCGKPLEKEV
LAAGGREDDLCPHVCVLQCHPGPCPPCKAFAPPRLCPCGKKRITTRCSDRKSVLTCGQCC
DKLLECGRHRCQQTCHVGPCGPCQVLFKASCFCSKTTEVLGCGDMVVKGELKEEGGVFSC
SSSCGKKLGCGNHVCSDMCHPGSCGECELLPSRVKTCCCGKTRLEVDRESCLDPIPTCSQ
VCDKLLHCGKHTCKEHCHVGECPPCLVLVSQKCRCSSTSRTVECFKTVMENQMFTCEKPC
GRKKNCGRHRCSEKCCPLSNPNNNLREGWDPHFCSMPCGKKLRCGQHACESLCHSGHCPP
CLETIFTDLSCACGRTSIPPPLPCGTPPPSCQLPCSVAQPCGHAGSHSCHFGDCIPCPVP
VAKECIGGHVVLRNIPCGSKDIRCNNPCGRTRQCGLHACGRTCHPPPCDSLSGGVQGFQA
PCGQTCSAPRRDCRHTCMAPCHPSSPCPDIKCEFPVTITCSCGRITASVPCDAGGSISNY
NADAIHEASIVQKLPVPLQPVDSNGRKVPLGQRKLMCDEECAKYERKKVLADAFDITSGL
DSLHFAESSVSELLSDMFRRDPKWVLAVEERCKFLVLGKSRGTTHGLKVHVFCPMLKDKR
DAVRLIAERWKLAVNAAGWEPKRFIVISVTQKSKAPARVLGVKGTTTLNTLFPPAFDPLV
DMDPRLVVSFPDLPRDADISALVLRFGGECELVWLNDKNALAVFHDPARAATAMRRLDHG
KVYQGAVSVVPNAGASAASSATNAWGGTGTVKEGGALTALKGNPWKKAVVQEAGRKEDSW
GDEEWATTGSANIQPSVLKKAAPITASLNRWNVLNQESSSSSSVTTGRAEVSGKQKESSA
VSKSVSDAGGSNEEGKQHGDNSDAAEVPEVVDDWEKAYE
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgcaatctcgaagagaacggagggatcgacctagggttccatcacaagctgct
gctgctgctgctcctcgtcagcaatgggttcccagagggagtgcagcaggaggaggagca
tcatccaacaacactgttctgccgccgcagccatccatttcaattcctcatccatatcag
aatgctgttgctgctggttcctccgatcaaggggttgctgctgctgtggctgcggctgct
ccaccggctgcggctcaccgtagaaacaatcagaaggtggaaagggagagggagagggag
agggatagagggaaaagcaggaatcagccggggagggaagtgggactcagagacactagt
ttgcctcagttggtgcaggagattcaggagaagctgatgagaggaactgtggaatgcatg
atttgctatgacatggttgggaggtctgcggctatttggtcttgctcgagctgctactca
atttttcacctgagttgcatcaagaagtgggcacgggcacccacctcggttgatttgacg
gcggacaaggatcaagggtttaattggcggtgtccaggttgtcaatatgtgcagcggacg
tctcatagggagattaggtatgtttgcttttgtgggaagaggccagaccctccttctgat
ttatatctgacaccgcattcttgtggggagccgtgtgggaagcctcttgagaaggaggtg
ttggctgcaggagggagagaggatgatctttgccctcatgtttgtgtcttgcaatgccat
ccaggtccttgccctccttgtaaagcatttgcccctccgcgcttgtgcccttgtgggaag
aaaagaatcaccacccgttgttctgatcggaagtctgttcttacctgtggccagtgctgt
gataagcttcttgaatgtggacggcatcggtgtcaacagacttgtcatgtgggtccttgc
ggtccttgtcaggttttgttcaaggcctcttgcttttgcagtaaaactactgaggttctt
ggttgtggggacatggtggtgaaaggtgaattgaaggaagaaggtggagttttttcttgt
agttccagctgtgggaagaaacttggttgtggtaatcatgtttgtagtgatatgtgtcac
ccaggcagttgcggggaatgtgagcttttaccaagccgggttaagacatgctgttgcggg
aagacaagattggaggtggatcgtgaaagttgtttggatccaatacccacctgctcacag
gtatgtgacaagcttctccattgcgggaaacatacttgtaaggagcattgtcatgttggt
gagtgtcctccgtgtttagttctagtttcacagaaatgtcgctgtagctccacttcacga
actgtggagtgctttaagacagtaatggagaatcagatgtttacctgtgaaaagccttgt
gggagaaaaaagaactgtgggaggcatcgatgtagtgaaaagtgttgtccactttctaat
ccaaacaataatttaagagagggttgggatcctcatttttgttcaatgccctgtggaaag
aaactaagatgtggccagcatgcttgtgagtcattgtgtcacagtggccattgcccacct
tgtcttgaaacgatattcactgatttatcatgtgcttgtggtaggacttcaattcctcct
cctcttccttgtggtacaccgcctccttcatgtcagcttccttgttcagttgctcagccg
tgtggccatgcaggctctcatagttgccattttggagactgcattccttgtccagtgcca
gtggctaaagaatgtattggtgggcatgtagttcttagaaatataccctgtggctcaaag
gatatcagatgcaataatccatgtggaaggaccagacagtgtggtttacatgcatgcggc
agaacatgtcaccccccaccttgtgatagtctatctggtggtgtgcaaggtttccaagca
ccatgtggccaaacgtgcagtgctccaaggagagactgccggcatacatgtatggctcca
tgccacccttcatctccttgccctgatataaaatgtgaattccctgttacaatcacttgt
tcttgtggccgtataacagcaagtgttccttgtgatgctggtggtagcattagtaattac
aatgctgatgccattcatgaagcttccattgttcaaaaattgcctgtgccacttcaacca
gttgattcaaatggcagaaaagttccccttggacaaagaaagttgatgtgtgatgaggaa
tgtgcaaagtatgagcgtaaaaaggttcttgctgatgcttttgacatcacttcaggtctg
gattctctccattttgctgagagctctgtttctgaattgctctctgatatgttcagacgt
gatccaaaatgggttttagctgtggaggagagatgcaaatttttggtacttggcaagagt
agaggaactacacatggtttaaaagtccatgttttttgtcctatgctgaaagataaaaga
gatgcagtgagattgattgctgaaagatggaagcttgcagtgaacgctgctggttgggag
ccaaagcggtttattgtaatatctgttacccaaaaatcaaaagccccagctcgcgtgcta
ggagttaagggcaccacaacattgaacacactctttcctcctgcatttgatcccttggta
gatatggaccctcgacttgttgtttcatttccagacttaccaagggatgctgatattagt
gctttggtgttgagatttggtggtgagtgtgagcttgtttggttgaatgacaagaatgct
ttagctgtttttcacgatcctgcccgagctgcaactgcaatgaggagattggatcatgga
aaagtttatcagggcgctgtgtcagtcgtcccaaatgccggggcatcagcggcatcttca
gctaccaatgcttggggaggaaccgggacagtgaaagagggaggagctttgactgcattg
aaaggtaatccgtggaaaaaagctgtggttcaagaggctggtcggaaagaagattcttgg
ggggatgaagaatgggctactactggttctgctaatatacagccatctgttttgaagaaa
gcagctccaataactgcttcactaaatcgttggaatgtcttaaaccaggaatcaagttcg
agttcatcggttacaacaggtagagctgaagtttctgggaaacagaaagaaagcagtgct
gtctcaaagtcggtgtctgatgcaggtggctcaaatgaagaagggaagcaacatggagat
aattcagatgcagcagaggttcctgaagtagtagatgattgggagaaggcttatgaatga
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