Lotus japonicus: 130739194
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Entry
130739194 CDS
T04348
Name
(RefSeq) zinc finger CCCH domain-containing protein 41
KO
K13192
RNA-binding protein 26
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lja01009
]
130739194
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130739194
03041 Spliceosome [BR:
lja03041
]
130739194
Protein phosphatases and associated proteins [BR:
lja01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130739194
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
130739194
Spliceosome [BR:
lja03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130739194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_3
RRM_Nup35
zf_CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
130739194
NCBI-ProteinID:
XP_057447415
LinkDB
All DBs
Position
2:70452573..70462923
Genome browser
AA seq
918 aa
AA seq
DB search
MELKVSSPKLESVAPSDCLSDPEEKEVSDDDDDDRNHKHRRRDDRSQSLERDVSDPVISR
PFRKRNKNFGNRPPFKGNESLSFETLKAYGDAATDKEFYSKFERRRPGFTPGPRTPLDMS
QRLRTNQSFTVDPGAGRGRGRESGFWNQRESRLSSMDVASQIVQQRSIPSSLYTGRGLPN
VSNAQNASWNTFGLIPAVPNGGMDMLHPLGLQGTLRQPMNSSLNVNIPRQRCRDFEERGY
CLRGDMCPMEHGVNRIVIEDVQGLSQFNLPVSLPSAPLIGAPAGSGSHHSVNASTTSVNS
KCIPGKKSVVGDDGMPVDSAYPGLGCTSGADLYDPDQPLWNNSGLESSNALLSIQSSKID
ETELISSEALNSDYPVGTTRTSVNLQGSSSSVWARMNSSRNRFDMKEKTNSMISSFHYPQ
NQLKEDNDELVGSRSTSCQGKQIIADDTDPRSMETLLKAQAFNMRNIRKPSQKALCTLFV
SGIPQRSNKRETLLTHFKKFGEVIDIHIPMNSDRAFVQFSKREEAEAALKSPDAVMGNRF
IKLFWANRDCVRNDCTASGNGVIVTPRGQAPAFVPSHPVVTDRRKDIHQTDASKTIFEVP
SPSDQPKHIIAGGPKAPPPSQKKYENLEHLKEELRKKQEMLDQKRNEFKRQLSKLEKQAT
GLKGEIVTEHAAKRPKTSMTTDVAKLTSPQSSDADPGMTSLHAEATTDRNKQLVSTVSQS
PKASTTMRVLEPTGLKQPIQPFVPVNRYKLDNRPTAFRIITPLPDGLANVASLKEHFLPY
GELSSVELVDVQVDDSSQQEAHINFTTRRAAERAFINGKCWKDHNLEFMWLASANSSNAT
GSREPSLSAPKEPLDRDDHSEEKLGNAVNQEAAVSDGERKNSENENGLKVMEMEPGEDLQ
CSPRQVSSAKQSPEGNVC
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaaagtttcatctccaaaactagagtctgttgcaccttctgattgtctcagt
gatcccgaggaaaaggaagtgagtgatgacgatgatgatgatcggaatcataagcatcgg
aggcgggatgatcgttctcagtctttggagagagatgtttcagatcctgttattagcagg
ccattcaggaagcgcaacaagaattttggaaatcggcctccgtttaagggaaatgagtct
ctatcctttgaaacactgaaagcttatggcgatgccgctacagacaaagagttctactcc
aagtttgagagaaggcgtcctggctttactccaggtcctcgaacacctttagatatgagt
caaagactacggacaaaccaatcatttactgtagatccaggtgctggcaggggaagaggc
agagaatctggtttctggaatcaacgtgaatctaggttgagctcaatggatgttgcttca
caaatagttcagcagcggtccattccttcaagtctttatactggacggggattaccaaat
gtttcaaatgcacaaaatgcatcctggaacacatttggtttaattccagcagtacccaat
gggggcatggatatgcttcatccattgggtttacagggaactctcagacaacccatgaat
tcatctttaaatgtgaatattcctcgtcaacgatgtagagattttgaggaacgtggatat
tgcctcagaggggacatgtgccccatggaacacggtgttaatcggattgtcattgaagat
gttcagggtctttcacagttcaaccttcccgtgtctcttccaagtgcgcccctaatcgga
gctcctgctggatctggatctcatcattcagtaaatgcttcaaccacttcagtgaacagc
aaatgtatacctggaaaaaaatctgtagttggtgatgatggtatgcctgtggatagtgca
tatcctggtcttggttgcacaagtggagctgatctctacgatcctgatcaaccactttgg
aacaatagtggtctggagtcttcaaatgcactcctatctattcagtcatccaagattgat
gaaactgagctcatatctagcgaggctctaaatagtgattatccagttggaactaccaga
acttctgtcaatttgcagggttctagttcatctgtctgggccagaatgaatagttcaaga
aacagatttgacatgaaagaaaaaactaactctatgataagttcttttcattatcctcag
aatcaactgaaggaagataatgatgaattagttggctcccgcagtacttcctgtcaagga
aagcaaatcatagcagatgatactgaccccagaagcatggaaacattattgaaggcacag
gcttttaatatgcgtaacatacgcaaaccatcccaaaaggcattgtgtactctatttgta
agtgggatacctcagagaagtaacaagagggagactcttcttactcattttaagaagttt
ggggaagttattgatattcatattccaatgaacagtgatcgagcatttgtccaattctcc
aaaagggaagaggctgaagctgctttgaaatcaccggatgctgtaatgggcaatcgtttt
atcaagctattttgggctaaccgtgattgtgttcgcaatgattgtactgctagtgggaat
ggtgtaattgttactccccgtgggcaagcacctgcttttgttccatctcatccagtcgtc
actgataggcgaaaagatatccatcaaactgatgcttcaaagactatatttgaagtacca
tctccttctgatcaacctaagcatatcattgcaggtggacccaaggctccacctccttcg
caaaagaagtatgaaaacttagaacatctaaaggaagaactgcgtaagaagcaggaaatg
ttggaccaaaagcgtaatgagttcaagcgccagctgagcaaacttgagaaacaagctaca
ggactcaagggtgaaatagttaccgaacatgctgcaaagagacccaaaacaagcatgacg
actgatgttgccaaactcacttctcctcaatcgtctgatgctgatcctggaatgacatct
ctacatgcagaggcaacaactgataggaataaacagttggtcagtactgtatcccaaagt
cctaaagcaagtacaacaatgagagtgctagaacctacaggcttgaaacagccaattcaa
ccatttgtgcctgtaaataggtacaaattggacaatcgtcccactgcatttagaatcatc
actcctttgccagatggtctagcaaatgttgcttctttgaaggaacacttcttaccatat
ggagaactttcttctgtagagctagtagatgtgcaagtcgatgatagtagtcaacaagag
gcacatataaatttcactactcgccgtgcagctgagagggcgtttattaatggtaaatgc
tggaaggaccacaatctggaattcatgtggctggcttccgctaattctagcaatgcaact
ggtagtagagaaccttctctatccgctcccaaggagcccttagatagagatgaccattct
gaagaaaaattgggaaatgcggtaaaccaagaagcagctgtatcagatggtgagcgtaaa
aattctgaaaatgaaaatggtttgaaggttatggaaatggaaccaggtgaagatctccag
tgttccccaaggcaagtttcttctgccaaacaatcaccagagggcaatgtctgttga
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