Lotus japonicus: 130739208
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Entry
130739208 CDS
T04348
Name
(RefSeq) polygalacturonase At1g48100
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
lja
Lotus japonicus
Pathway
lja00040
Pentose and glucuronate interconversions
lja01100
Metabolic pathways
Module
lja_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130739208
Enzymes [BR:
lja01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
130739208
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
DUF1565
NosD
Motif
Other DBs
NCBI-GeneID:
130739208
NCBI-ProteinID:
XP_057447437
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Position
2:70813107..70815911
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AA seq
427 aa
AA seq
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MKGIKLIIAIVFSLWSSSTFESCIAATRGNYHWRKLKAASATNFNVLDYGAKGDGHADDT
KAFQGAWAAACKTEGSTMVVPSGYVFLVKIISFSGPNCVPNIVFQLDGKIIAPTSPSAWG
SGTLQWLEFTKLSKIAIKGKGVIDGQGSVWWSGNGKLPGTKPTALRFYGSNGVTVTGITI
QNSQQTHLKFDSCTNVQVFDIKTSSPGDSPNTDGIHLQNSQEVVIYSSTLACGDDCISIQ
TGCSNVLVHNINCGPGHGIGIGSLGRENTKACVRNVTVRDITIQNTLTGVRIKTWQGGSG
SVQNVLFSNIQVTDVKTPIMIDQYYCDKSKCRNQTSAVAVSGIHYVNVKGTYTWEPVYFA
CSDSLPCSGITMDTIELKASQESKNSNVPFCWAAYGEIKTKTVPPVDNCLERGNPRSTGI
ISKIDSC
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtattaaactgatcattgccattgtgttttctttgtggtcttccagtaccttt
gaaagctgcatagccgccactagaggtaattaccactggaggaaactcaaagcagcctct
gctactaattttaatgtgttagactatggtgctaaaggtgatggacatgcagatgacaca
aaggcatttcaaggtgcatgggcagctgcttgcaaaacagagggatcaacaatggttgtt
ccatctggttatgtcttcctggtgaaaataatttctttctcaggcccaaattgtgtgcca
aacattgtttttcagttggatggcaaaatcattgcacctacaagcccttcagcttgggga
tcaggtaccttgcaatggcttgaattcacaaagcttagtaagattgcaatcaaaggtaaa
ggagtcattgatggtcaaggctctgtctggtggagtggcaatggaaaactgccaggaacc
aaaccaactgcactcaggttctatggaagtaatggtgtaacagtaacaggtataacgatt
caaaacagtcagcagacccatctcaagtttgattcatgcacaaacgttcaggtgtttgat
atcaagacttcatcacctggtgatagccccaacacagatggaatccacctacaaaactca
caggaagtggtcatctatagcagcacacttgcttgtggggatgactgtatttccatacaa
actgggtgctccaatgtattggtacacaacatcaattgtggaccaggtcatggaattggc
attggaagtcttggaagggagaacaccaaagcctgtgttagaaatgtcacagtccgggat
attactatccagaataccttaaccggtgtgagaatcaaaacatggcagggaggctctggc
tcagtccaaaatgttttgttctccaacattcaagttactgatgttaaaactccaataatg
attgaccaatactattgtgacaaaagcaagtgccggaatcaaacatcagcggtggcagtt
tcaggcatacactatgtgaatgtaaaaggaacatacacttgggagcctgtttattttgca
tgcagtgatagtttaccttgtagtggtataaccatggacaccatagagctaaaagcaagt
caagaatctaagaactccaatgttcctttttgttgggcagcatatggggagataaagact
aaaacagtgccacctgttgataattgtttggagagaggcaacccacgaagcactggaatc
atttctaaaatagattcttgctga
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