Lotus japonicus: 130739342
Help
Entry
130739342 CDS
T04348
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lja03000
]
130739342
03036 Chromosome and associated proteins [BR:
lja03036
]
130739342
Transcription factors [BR:
lja03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
130739342
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
130739342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
HMG_box
Rttp106-like_middle
HMG_box_2
HMG_WDHD1
CDC45
DNA_pol_phi
YL1
CHDNT
Motif
Other DBs
NCBI-GeneID:
130739342
NCBI-ProteinID:
XP_057447600
LinkDB
All DBs
Position
2:complement(72298678..72303981)
Genome browser
AA seq
642 aa
AA seq
DB search
MTDGGHLFNNITLGGRGGTNPGQIKIFSGGIAWKRQGGGKSIEIDKADIMGVTWMKVPRT
NQLGVQIKDGLYYKFTGFRDQDVVSLTSFFQNNFGISVDEKQLSVSGRNWGEVDLNGNML
AFMVGSKQSFEVSLADVSQTTLQGKNDVMLEFHVDDTTGANEKDSLMELSFHIPNSNTQY
VGDENHTPAQVFRDKIMSMADVGAGGEDSVVTFDGIAVLTPRGRYSVELHLSFLRLQGQA
NDFKIQYSSVVRLFLLPKSNQPHTFVIVSLDPPIRKGQTLYPHIVMQFETDVVFQSELAI
NEDLYNTKYKDKLELSYKGLIHEVFTTILRGLSGAKVTKPGKFRSCLDGYAVKSSLKAED
GILYPLEKSFFFLPKPPTLILHEEVDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNI
QRNEYHNLYSFIREKGLKIMNLGGAQPTVGMAQVLENDDDDAVDPHLERIKNEAGGDESD
EEDEDFVLDKDDGGSPTDDSGGDDSDGSDSGDEKEKPAKKEPKKDLPSKASTSKKKPRDA
DEDGKKKKQKKKKDPNAPKRAMSGFMFFSQMERENLKKTNPGISFTDVGRVLGEKWKKMS
TEEKEPYEVKARADKKRYMDEISGYKNPQPMNVDSGNESDSP
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgacagacggtggtcacctcttcaacaacatcaccctcggcggccgcggcggcacgaat
ccagggcagataaaaatattctctggaggaattgcatggaaaagacaggggggtggtaaa
tcaattgagattgataaagctgatataatgggggtcacatggatgaaagttccaaggact
aatcagcttggtgttcagatcaaagatgggctgtactacaaatttactggattccgtgat
caggatgttgtaagcttgaccagttttttccaaaataactttggaatatctgtagatgag
aagcagctttctgttagtgggcgcaattggggagaagttgatctaaatggaaatatgctg
gcattcatggttggttcaaagcaatctttcgaggtgtctttagctgatgtctctcaaacg
acgcttcaagggaaaaatgatgtgatgttggagttccatgtggatgacacaactggagct
aatgagaaagattcattgatggagttaagtttccatataccaaattccaatacccagtat
gttggcgatgaaaatcatactcctgctcaggttttccgtgataaaataatgtctatggct
gatgtcggtgctggaggtgaagattctgttgttacatttgatggtattgcagtccttaca
ccaagaggacgttacagtgttgagttacacctgtcattcttgcggcttcaaggacaggct
aatgattttaaaatccaatatagcagtgtggttcgcctatttttacttcctaagtccaat
cagccacatacttttgtcattgttagtcttgatccccctattcggaaaggacaaactttg
taccctcatattgtgatgcagtttgaaactgatgttgtttttcaaagtgaattggcaata
aacgaagatctttataacactaagtacaaggacaagttggagctgtcttataaggggcta
atccatgaagtgttcaccacaatattacgtggcttatctggggctaaagttaccaagcct
ggaaaatttaggagttgtctagatggttatgcagtgaaatcatctttgaaagctgaagat
ggaattctgtatccccttgagaagagcttctttttcctacctaaacctcccactcttatt
cttcatgaagaggttgactatgtagaatttgagcgacatgctgccggtggttcaaatatg
cattattttgaccttcttatcagattaaaatctgagcaagagcatctcttccgcaatatt
cagagaaatgaataccataatttgtatagttttatcagggaaaagggcttaaaaattatg
aacttaggaggtgcccagccaactgttggtatggctcaagttcttgagaatgatgatgat
gatgctgttgatccacatctagagcgcattaaaaatgaagctggtggagatgaaagtgat
gaggaggatgaagattttgttcttgacaaggatgatggaggttctcctactgatgattct
gggggggatgattctgatggtagtgatagtggtgatgagaaagagaagcctgccaaaaag
gaaccaaagaaggatctgccttctaaggcatctacttctaagaagaagccaagagatgct
gatgaagatggaaagaagaaaaaacagaagaagaaaaaggacccaaatgcacccaagagg
gcaatgtctggtttcatgttcttttcgcaaatggaaagagagaatctaaagaaaactaat
cctggaatttcatttacggatgttgggagagtacttggagagaaatggaaaaagatgtca
acggaggagaaagaaccatatgaggtaaaagcccgtgccgataagaaacggtatatggat
gagattagtggctacaagaatccacaaccgatgaatgttgattcaggaaatgaatctgac
agtccctaa
DBGET
integrated database retrieval system
