Lotus japonicus: 130739415
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Entry
130739415 CDS
T04348
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
lja
Lotus japonicus
Pathway
lja04120
Ubiquitin mediated proteolysis
lja04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130739415
04120 Ubiquitin mediated proteolysis
130739415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lja04121
]
130739415
Enzymes [BR:
lja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130739415
Ubiquitin system [BR:
lja04121
]
Ubiquitin ligases (E3)
U-box type E3
130739415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
130739415
NCBI-ProteinID:
XP_057447673
LinkDB
All DBs
Position
2:complement(73264539..73272442)
Genome browser
AA seq
1039 aa
AA seq
DB search
MAAAKPQRTPQEVEDIIIRKIFLVTITEPDATATTDSRIVYMEQTAAEFLSEGKDLRLSR
DTMERILIDRLSGDADESPFHYLFGCYQRAYDEAKKIAGMKDKELRAEMEVVVRQAKKLS
VSYCRIHLANPELFPSRSTANDAGHSPLLPLVLAEVGGGGIGGFGGGGGGVKSPPGFLEE
LFRDADFDSLDRILKGLYEELRGSVMKVSALGNFQDSLRALLFLVRFPAGAKSLVSHQWW
IPKGVYMNGRAIEMTSILGPFFHVSALPDQTFFRSLPDVGQQCFSDSSTRRQADLVSSFS
TIKNVMNNLYGGLSEVLLVLLKSSDTRENVLEYLAEVININASRAHIQVDPITCASSGMF
VNLSAVMLRLCEPFLDANLTKRDKIDPNYVHYSNRLKLSGLTALHASSEEITEWLNSKNP
SKAGGIDQCNDDKKRLQQSQEASSSGSNNAGGLSKENSARGQKSKYSFICECFFMTARVL
NLGLLKAFSDFKHLVQDISRSEDALSTLKGMQGHSPSPQLELDISRLEKELELYSQEKLC
YEAQILRDNTLIQNALTFYRLMIVWLVGLVGGFKMPLPQTCPMEFATMPEHFVEDAMELL
IFASRIPRALEGVVLDEFMNFIIMFMASPDFIKNPYLRAKMVEVLNCWMPRTSGSSATAT
LFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWKVPSHRNAWR
QIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWERRPVQERQER
TRLFHSQENIIRIDMKLANEDVSMLAFTSEQITVPFLLPEMVERVASMLNYFLLQLVGPQ
RKSLSLKDPEKYEFRPKDLLKQIVHIYIHLARGDTNAIFPAAISKDGRSYNDQLFSAGAD
VLRRIGEDPKVIQEFIQLGAKAKVAASEAMDAEATLGEIPDEFLDPIQYTLMKDPVILPS
SRITVDRPVIQRHLLSDASDPFNRSHLTADMLIPDVELKARIEEFVRSQEMKKHGEGLSI
QSSSKATIQTTNGEKMLID
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagcaaaaccccaacgcaccccacaggaagtggaggacatcatcatccgcaaa
atcttcctcgtcaccatcaccgaacccgacgccaccgccaccaccgactccagaatcgtc
tacatggagcaaaccgcggcggagtttctcagcgaggggaaggaccttcgcctctcgcgc
gacaccatggagaggatcctcatcgatcgcctctccggcgacgccgacgaatcgccgttc
cactacctcttcggctgctaccagcgcgcctacgacgaggctaagaagatcgccggcatg
aaggacaaggaactcagggcggaaatggaggttgttgtcaggcaggcgaagaagctctct
gtctcctactgcaggattcatctcgcgaaccctgagctcttcccgagccggagcactgct
aacgacgctggacactcgccgctgctgccgctggtcctcgcggaggttggtggtggggga
atcggagggtttggcggaggtggtggtggagtgaagagcccaccggggtttttggaggag
ctgtttagggatgctgattttgatagtttggacagaatattgaaagggttgtatgaagag
ttgagggggagtgtgatgaaggtttctgctcttggaaactttcaggattctctgagggct
ttgttgtttttagtcaggttccctgctggtgcaaagtctcttgtgagccatcaatggtgg
attcccaaaggggtttacatgaatggtcgcgccatcgaaatgaccagcattttggggcca
ttcttccatgtcagtgctctccctgatcaaacctttttcaggagcctgcctgatgttgga
cagcagtgtttttctgattcatcaactcggcgacaagctgatttagtatcctcgttttcc
actatcaaaaatgtcatgaataacttgtatggtggcctatctgaagtacttctcgtcctc
ctcaaaagttcagatactcgagaaaatgtacttgagtatcttgcagaggtgatcaatata
aatgcatccagggctcatatacaggttgaccctattacttgtgcaagttctggcatgttt
gtaaatctcagtgctgtcatgcttcgtctctgtgaaccttttttagatgctaatttaaca
aaaagggataaaatagatccgaattatgtacactactcaaatcgtttaaagctaagtggg
ttgactgctcttcatgcatcatcagaagaaattactgaatggcttaatagtaaaaaccca
tctaaggctgggggaatcgatcaatgtaatgatgataaaaaacgcttgcaacaatctcaa
gaggccagtagttctggtagtaataatgctggtgggctttcaaaagaaaattctgcacgt
ggtcaaaagtcgaaatattcatttatttgcgaatgcttctttatgacggcaagagtgctc
aacctaggccttttaaaagcattttctgacttcaaacacttagttcaggatatttctaga
agtgaagatgctctttccacacttaaaggcatgcaggggcactcaccctctcctcagttg
gaattggatatatctcgacttgagaaggaactggagttgtactcgcaggaaaagctttgt
tatgaagctcagatattgagggataacacgcttattcagaatgctcttacgttctaccgc
ttgatgatcgtttggttggttggcttggttggtggattcaagatgcctctaccacagaca
tgcccaatggaatttgctaccatgcctgagcattttgtagaagatgccatggaactttta
atatttgcttcccggattcctagggccttagagggagtcgtactggatgagtttatgaac
tttataattatgttcatggccagccctgattttatcaaaaacccatatctgagagcaaag
atggttgaagtcttgaattgctggatgccccgtacaagtggctcatctgctacagctact
ctatttgaaggacaccaactgtctcttgagtatcttgtgaggaatcttctgaaactttat
gttgacattgagtttaccggttctcacacacagttctatgacaaatttaacatccgtcat
aatattgctgaactccttgaatacctatggaaggtccctagtcatcgtaatgcttggaga
cagatcgctaaagaggaggaaaagggtgtctatttgaatttcttgaactttctgattaat
gatagtatatatcttcttgatgaaagtctgaacaaaattcttgagctaaaagaattggaa
gctgagatgtcaaatacagctgagtgggaaagacggccagttcaggagaggcaggagagg
acccggttattccattctcaagaaaatattattcgaatagatatgaagttggcaaatgaa
gatgttagtatgcttgcatttacttcagaacagattactgttccattcctacttccagag
atggtggaaagagtggctagtatgctgaattactttctgctgcaattggtgggtccccaa
agaaaatcgcttagtctgaaagatcctgagaaatatgaattccgtccaaaggatttgcta
aaacagattgtgcacatatatattcacctggctagaggtgacacaaatgctatcttccca
gctgcaatctccaaagatggtagatcatacaatgaccagttgtttagtgctggtgcagat
gtcctacgtagaattggtgaggatccgaaagtcatacaggagtttattcaactaggtgct
aaagcaaaagttgctgcttcagaagccatggatgccgaagctactctgggagaaatacca
gatgaattccttgatccgattcaatacactttgatgaaggatccagttatcttgccttct
tcaaggatcacggttgatcgtcctgtcattcagagacatcttcttagtgatgcttctgac
ccattcaaccgttctcatcttactgcggatatgctgattcctgatgttgaactaaaagca
cgaattgaggagtttgtcaggtctcaggaaatgaagaaacacggtgaagggctaagcata
cagagtagtagcaaggccaccattcagaccacaaatggggaaaaaatgttgattgattag
DBGET
integrated database retrieval system
