Lotus japonicus: 130739436
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Entry
130739436 CDS
T04348
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lja03036
]
130739436
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
130739436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
Cnd1
PHD
PHD_2
Motif
Other DBs
NCBI-GeneID:
130739436
NCBI-ProteinID:
XP_057447705
LinkDB
All DBs
Position
2:complement(73483764..73504458)
Genome browser
AA seq
1816 aa
AA seq
DB search
MNFPPPSGANAAAAMPSSGIRGISLSNTVHSEVASCLPLPSLPVFCGASDQDLRLFDAPM
TFNRRDVLAQSSKIAELLQHTDVSYLNLRDDAKGVRHNYGEPLELHDEVLRCNPEAFECS
AAGPFKEQFSGGALIEKKPVESNCSVPSQTHKDYNATQSRQLDSFSTNDISMLCSKKSKV
KKKGGDGASVALDPAELPDASIGRFHEYLEDLCSKAEFNSDDRDEAEWLPLPLSDLRLLV
NEIVSIREKKLLHLVPVEILVRLLKVLDHQIHRAEGLSIVDCDNSNSELVSSLLIALESI
HAALAVMSHAEMPKQLYKEEVIERILEFSRHQIMDVMCACDPSYRALHRPNENTAFEVDD
FDEDDAEFGSASKKRRPSKSLKLKKPASSRVSTAVNTILQKLCTILGLLKDLLLIERLSD
SCILQLVRTSITTFLVDNIQLLQLKTIGLVSAIFYLYTQHRTYVIDEMIQLLLKLPHSKR
ALRTYYIRDEEQKQIQMVTALLIQLIQCSANIPDALRQASSGNAVLEVSVDANYPTKCLE
AATEAGCLFWSRVLQRFASVKTQDASELKSIMENLVTDLLTTLNLPEYPASAPFLEVLCV
LLLQNAGLKSKDISARSMAIDILGTIAARLKRDAMICSQEKFWIFQGLLSQDADSQHYPK
DTCCVCLGGRAENLYTCHDCQRLFHADCLDIKEHDVSNQNWYCHTCICSKQLLVLQSYCT
SQRKDGVKKNHNSSTDDSEVPMHEVVQQLLLNYLQDVASADELHLFSCWFYLCMWYKDEP
KFQQNSVYYIARMKSRIIVRDSGTVSSKLTRDLIKKITLALGQNSSFCRGFDTILHLLLA
SLRENSPVIRAKALRAVSIIVEADPEVLGDKRVQLAVEGRFCDSAISVREAALELVGRHI
ASHPDVGFKYFEKIAERIKDTGLSVRKRAIKIIRDMCTSNANFSGFTRACTEIMSRISDD
ESSVQDLVCKTFYEFWFEEPSASETQVFGDGSTVSLEVAKKTEQIVEMSRGGMPNQQLVT
VNPLLVTVIKRNLTLDFLPQSAKAIGVNPVSLATVRKRCELMCKCLLEKMLQVEEMNSNE
VAVGALPYVLVLHAFCLVDPTLCAPASNPSQFVVTLQPYLKTQVDKREAAQLLESIIFII
DAVLPLLRKLPPCIVEELQLDLKQMIIRNSFLTVVHACIKCLCSVSKMAGKGAAVVEHLI
QVFFKYLDKEAVDSKQLVGRSLFCIGLLVRYGNCLLASSSNQHSDVKRSLNLCMKYLVVE
DLGLKARSLQALGFVLIARPEYMLEKDIGKILERSLSSTADTCLKIQALQTMFEYLLDAE
SQMTTDKTDGNVADYSVGAGQSVPVAAGAGDTNMCGGIVQLYWDNILGTCLDFSEPVRQS
ALKIVEVVLRQGLVHPITCVPHLIALETDPLESNSKLAHHLLMNMNEKYPAFFETRLGDG
LQMSFMFIQSICGSSENVNHKNQSRIPVSGKGKPEAGSLTQARVGVSRIYKLIRGNRISR
NKFMSSIVRKFDNPRWNKLVIPFLRYCTEVLALLPFTSPDEPLYLIYAINRVVQLRAGPL
EANFKSWNSSLLRSEGHSTPYENGTCRWGPDEPILATPVMSMDLNETFQQNLHAQPIFDD
MKSVDLNRTNHQLPDHPLSHNGNLEAKPQAASFMDSCTFSKDDTEEVQAGCLSAIALQLL
LKLKRHLKIMYSLDDARCQAYSPSEPPKPGEVLSKQSIALNISEYQFSLPTTPQELTQRY
QEFKNALKEDTMDYSLYTANIRRKRPSITPRKVRKSVHTARGGFEEEEDDDADWAGGMRQ
INVSGRRANLRSSRQH
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgaattttccacctccttccggcgccaacgccgccgccgcgatgccgtcctccggcatc
cgcggcataagcttgtccaacactgtccactccgaagtcgcctcctgcttgccgctgccg
tcgcttccggtcttctgcggcgcatccgatcaggacctccgactcttcgacgcgccgatg
acgttcaaccgccgcgacgtcctcgctcagtccagcaagatcgccgagcttctccagcac
accgatgtgtcgtatttgaatttaagagatgatgctaagggtgttcggcataactatggt
gagcctttagagctccatgatgaagttctcaggtgcaatcctgaagcatttgaatgcagt
gctgcaggtcctttcaaggagcagttctctggcggggcattaattgaaaaaaagcctgtt
gaatcaaattgttctgtcccgagtcagactcacaaagactacaatgcaacccaaagccgt
cagctcgatagtttttcgacaaatgacatatctatgttgtgttctaaaaaatctaaagtc
aagaagaaagggggtgatggagcatctgttgcactcgatcctgctgagcttccagatgcc
agcattggaaggtttcatgaatatttggaggacttatgtagcaaagccgaatttaatagt
gacgatcgagatgaagcagaatggttaccgttgcctctttcagatcttagattgcttgtt
aatgaaatagtgtctatacgtgagaagaaacttcttcacttggttcctgtagaaatactt
gttagattactaaaagttctagatcatcagatacatagagcagaaggcctgtcaattgtg
gattgtgataattccaattcagaactagtttcttctcttttaattgcgttggagtccatt
catgctgccctggcagtgatgtcccatgctgagatgccgaagcaactttataaagaagag
gttattgagagaattctggagttctccaggcatcagataatggatgtgatgtgtgcatgt
gatccatcgtaccgtgcattacataggcctaatgaaaacactgcatttgaagttgatgat
tttgatgaggatgatgctgaatttggttcagcaagcaaaaagcggcgccctagcaagtct
ttgaagttgaagaaaccagcatcaagcagggtctctactgctgtgaataccattcttcag
aagttgtgtactattctcggactactcaaggatttgttgttaatagaaaggttatcagat
agttgcattttacaacttgtaagaacaagcatcacaacatttttagttgataacatccag
cttttgcagttgaagacaattggtttagtcagtgcgatattctatttgtacacacaacat
cgcacttatgtgatagatgaaatgattcagcttcttttgaaattaccgcattcaaagcga
gctttaagaacatattacatacgtgatgaagagcaaaagcagatccagatggttactgct
ttgttgattcagttaattcaatgcagtgcgaacattcctgatgctttaagacaagcatca
agtggtaatgctgtattagaagtctcagtcgatgctaattatccaactaaatgtcttgag
gcagcaacagaagccggttgtttattttggagccgtgtacttcagcgttttgccagtgta
aagactcaagatgcttctgagctgaaatccataatggagaatcttgttacagatttgctg
acaactctgaatttacctgaatatcctgcttcagctccttttctagaggttctctgtgtc
ctactacttcagaatgctgggctcaaatccaaggatatctctgcacgttccatggcaatt
gatattcttggtacaattgctgcaaggttgaagcgcgatgctatgatttgtagtcaagag
aagttctggatatttcagggtttacttagtcaggatgctgattctcagcattatccaaag
gatacctgttgtgtctgtttgggtggaagggcagaaaatttgtacacatgtcacgactgc
cagagactttttcatgctgattgcctagacattaaagagcatgatgtttccaaccagaac
tggtactgtcacacatgcatctgctctaagcaactgcttgtattacaatcatattgcacc
tcccagcgcaaggatggtgtaaaaaagaatcacaattcgtcaacagatgattctgaagtt
cctatgcatgaagttgttcaacagttgcttttgaattaccttcaagatgtcgcctctgct
gatgaactgcatctttttagttgctggttttatctatgcatgtggtataaagacgaacca
aaatttcagcagaattctgtttactacattgctagaatgaaatcaagaatcatagtgcgg
gattctggtactgtgtcttctaagttgacaagggatttaatcaagaaaattactttagct
ttaggccaaaacagttcattttgtcgagggtttgatacaattcttcacttgcttctggca
agtttgagggagaactctccagttattagggctaaggctttacgagcagttagtatcatt
gtagaggctgatccagaggtactgggggataagcgggtccagttagcagttgaaggcaga
ttttgtgactctgcaatttctgttagagaagcagctttggaacttgttggcaggcatatt
gcttcgcatccagatgttggttttaagtattttgagaagattgcagagagaatcaaagat
actgggttgagtgttcggaaacgagctataaaaattattcgagatatgtgtacttcaaat
gccaatttctctgggtttaccagagcttgcacagagataatgtcacgtattagtgatgat
gaatcgagcgtccaggatctggtttgcaaaactttttatgagttctggtttgaggaacct
tctgcttcagaaactcaggtctttggtgatggtagtactgtttcacttgaggtagctaag
aaaacagagcaaattgttgaaatgtcaagggggggaatgcccaatcaacaacttgtaacc
gtcaatccacttcttgtaactgtaataaagcgcaacttgacacttgattttttaccacaa
tctgcaaaagccattggggtcaacccagtgtctcttgcaacagtgcgtaagcgatgtgag
ttgatgtgcaaatgcttgctggagaaaatgttacaggttgaggaaatgaacagtaatgaa
gtggctgtaggagcacttccatatgtgctagtcttgcatgcattttgtcttgtggaccca
actctctgcgcaccagcttctaacccttcccaatttgttgttacattgcagccatatctg
aagacccaggttgacaagcgtgaggctgcgcaattacttgagagtataatatttataatt
gatgctgtattgcccttgcttcggaagttacccccgtgtattgtggaagaacttcagcta
gatttgaaacagatgattatccggaattctttcttgacagttgtccatgcttgcatcaag
tgcctctgctctgtgagtaagatggcaggaaaaggggctgctgtagttgagcatcttatt
caagtcttcttcaaatatttggataaagaggcagttgatagtaaacagcttgtcggacga
tctctgttttgtattggtttgcttgttcgctatggcaactgtttgttagcaagctccagt
aatcaacatagtgacgtcaaaaggagcctcaacttgtgtatgaagtatcttgttgtggag
gatttaggtcttaaggctagatcattgcaggccctagggttcgttctaatagcaaggcct
gaatatatgttggaaaaagatattggaaagatactggagcgatcattatcttctactgct
gatacttgccttaagattcaagcattgcaaaccatgttcgagtatcttcttgatgctgaa
agccaaatgacaacagataaaactgatggtaatgtagctgattactcagttggagctggg
cagagtgttcctgttgctgctggtgctggggatacaaacatgtgcgggggtatagttcag
ttgtactgggataatattttgggcacatgtttggatttcagtgaacctgttcgccaatca
gccttgaagattgtcgaagttgtgctgcgccaaggtcttgttcatcccatcacctgtgtg
ccacaccttatagcactagaaacagatcctctggagtcaaattccaagttggctcatcat
ctcttaatgaatatgaatgagaagtaccctgcgttttttgaaacccgcttgggcgatgga
cttcaaatgtcatttatgttcatccaatccatttgcggtagttctgaaaatgttaaccat
aaaaaccaatctcggatccctgtttctgggaagggcaaacctgaggctggctcactcact
caagcaagagttggggtttctcgaatatacaagctcatccggggtaaccggatatcaagg
aacaaatttatgtcctcaattgtgcgaaaatttgataatcctagatggaacaaattagta
atacctttcttaagatattgcacagaggttcttgccttgctgccattcacttcacctgat
gagccactttatttaatctatgctatcaatcgagtagttcagctgagggctgggccatta
gaggcgaactttaaatcctggaattcaagcttgttacgaagtgagggtcatagtacacct
tatgaaaatggaacatgtcgatgggggccagatgagcctattcttgcaaccccagtgatg
tcaatggacttgaatgaaacatttcagcaaaatctacatgctcagcctatttttgatgac
atgaaatcagtggatttaaatagaactaatcaccaattgccagatcatcctttatcacat
aatgggaacttggaagctaagccgcaagctgcaagcttcatggattcttgtaccttctcc
aaagatgatacggaggaagttcaggctggctgtttatccgccattgcattgcaacttctt
ttaaagctaaagagacatctaaaaatcatgtatagtctggatgatgcccgatgtcaggct
tattctccaagtgaaccaccaaaacctggagaagttttgtctaaacagagtattgcgttg
aatatcagtgaatatcagtttagtttgcctacaactccgcaagaattaacacaaagatac
caggaatttaagaatgcattgaaggaagacacaatggattattcgctttacactgcaaat
ataagacggaagcgaccctcaattacgcccagaaaagttcggaaatctgtacacacagct
cgtggtggtttcgaggaagaagaagatgatgatgcggattgggctggtggcatgcgccag
ataaatgttagtgggcgcagggctaaccttagaagctctagacaacattga
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integrated database retrieval system
