Lotus japonicus: 130739492
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Entry
130739492 CDS
T04348
Name
(RefSeq) uncharacterized protein LOC130739492
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
lja
Lotus japonicus
Pathway
lja03022
Basal transcription factors
lja03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130739492
09124 Replication and repair
03420 Nucleotide excision repair
130739492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lja03021
]
130739492
03400 DNA repair and recombination proteins [BR:
lja03400
]
130739492
Transcription machinery [BR:
lja03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
130739492
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
130739492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
NAD_binding_9
Motif
Other DBs
NCBI-GeneID:
130739492
NCBI-ProteinID:
XP_057447778
LinkDB
All DBs
Position
2:74220171..74224196
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AA seq
186 aa
AA seq
DB search
MVISSTNPHNKEIAIRRRIASIFNKREDDFPSLREYNDYLEEVEDMTFNLIEGVDVAAIE
AKIAKYQEENSEQIMVNRARKAEELAAALAASKGQAAQTANDVGASQDFGAVPQGQYAPT
FAGQPRPTGMAPQPLPLGGSDMPGYAGDDDETMRLRAERGARAGGWSLEISRKRALEEAF
GSMWVC
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggtaatctccagtaccaatccccacaataaggagatagccatcaggaggaggattgct
agcatatttaataaacgtgaagatgatttcccatctttgagagaatacaatgattacttg
gaggaagtagaggacatgacgtttaacttgattgaaggagttgatgtcgctgctattgaa
gcaaagattgctaaataccaggaagaaaattcagaacaaataatggttaatcgtgctcgt
aaggctgaagaattagctgcagctttggcagcaagtaagggacaagctgcccaaactgct
aatgatgtgggtgcaagccaagactttggtgctgttcctcagggacaatatgcacctaca
tttgcaggacagcctagaccaaccggcatggctccacagcctttaccactcggagggagt
gacatgccgggctatgcaggtgatgacgatgaaacgatgaggctacgagcggagagagga
gcaagggctggaggatggagtctagaaataagcaggaagagggcacttgaagaagctttt
ggaagcatgtgggtttgttga
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