Lotus japonicus: 130740137
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Entry
130740137 CDS
T04348
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 21
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lja01002
]
130740137
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lja04121
]
130740137
Enzymes [BR:
lja01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130740137
Peptidases and inhibitors [BR:
lja01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130740137
Ubiquitin system [BR:
lja04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130740137
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
130740137
NCBI-ProteinID:
XP_057448628
LinkDB
All DBs
Position
2:80903175..80906991
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AA seq
702 aa
AA seq
DB search
MNSHSSSSSELPPLPETLDGSSSTHLVPVFSTLAGDSFYSPTRALSPPPPPPPPSLTIDD
NGNIYAGVVDEDALKVVPGRDHSFQLLIDDPSSAPLYVLPPAGNQFGPVFSSRVTAVAPP
DVLNPEPVCDLSWLFTNNSSSKNRISATPATSPPEAAPSGIGAGLVNLGNTCFLNAILQC
FTHTVPLVQGLLTCGHSAPCDRHVRGFCVLCALRDHVDSSLVLSGQSLSPSKLVDNLSYF
SSLFTKYQQEDAHEFMQLALDRLEGCFLNLKKNDMSVEDDNLVKKVFGGRLISKLRCCNC
CHSSDTYEPLIDISLEIGNADSLSSALESFTMVENIDAKFNCDGCKEEVSKEKQLMLDET
PAVATFHLKRFKSDGTSVQKIDKHVDFPLELDLTPYTLSGEKNDAPLKYDLYAIVVHNGV
SYTSGHYFCFVRSAPDTWHKMDDSKVTKVSENSVLSEEAYILFYARQGTPWFSSVFESLR
PYLKPSIMNTSPKSVLDSVANSDKSNAIVEGGATNESDPFSKNLLDMSCHEVLEINDTSD
DAPHDCGYSVGPNSATLDSIVMPNRNSSIEIDALVQNNVCAEVSEENAAFHPLTPPCSPS
NAADNIFPISHDHLKKENHGSCKRPSNNLSGGSERQVAERYISKMSGARKAAFMKFFPQS
ESPSDKKRKKVDSLQCKKDESSVSKKSNRVSVSHPVTAGTSK
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaactctcattcttcttcttcttctgagttaccccctcttcccgaaaccctagatggg
tcttcttcaacccatttggtccctgttttctccactcttgccggagattcattttattcc
cctacccgtgctctctctcctcctccgccaccgccgccgccgtcgctaaccatcgatgac
aacggtaatatttatgccggcgttgtcgatgaggatgctctgaaagtggttcccggcagg
gatcactcctttcagctcctcatcgacgacccttcctctgccccgctgtatgtccttcct
cccgccggtaatcaatttgggccggtgttctcgtcgcgggtcaccgcggtagcaccacct
gatgttctgaaccctgaacctgtttgcgacctttcctggttgttcacgaacaattcatct
tccaagaatcgaatctccgccactcccgccacttccccccctgaagctgcaccttctggg
attggtgctgggcttgtaaatctgggcaatacatgctttctcaacgcgatcctgcaatgc
tttacgcacacagtgcccctagtccagggtcttctcacatgcggccattccgcgccttgt
gatagacatgttcgtgggttctgcgttctttgcgctctacgtgaccatgttgacagttcc
ttggtgttatctggacaatctctgtctccctcgaaacttgtggataatctgagttatttt
tcttctctatttacaaaataccaacaggaggatgctcatgaatttatgcagcttgcatta
gatagactggaaggatgtttcctaaatttgaagaagaatgatatgagtgttgaagatgat
aatcttgtaaagaaagtatttggaggtcgtcttattagcaaacttcgatgttgcaattgt
tgccactcttctgacacctatgagccacttattgacattagtttagaaataggaaatgca
gattccctttcaagtgctctggaatctttcactatggtggaaaatattgatgcaaagttc
aattgtgatggctgtaaggaagaagtgtctaaggaaaaacagcttatgctggatgaaaca
cctgcagttgcaacatttcatttgaagagatttaagtcagatgggacctctgttcaaaag
attgataaacatgttgatttcccactggagttggacttgaccccatacaccttatctggt
gaaaaaaatgatgcaccattgaagtacgatctatatgcaattgttgtgcataatggagtt
tcctatacctcaggacattacttttgctttgtccgctctgctccagacacatggcataag
atggatgattcaaaggttaccaaggtgtcagaaaactctgtgctgtctgaggaagcatac
atactgttttatgcacgacagggaaccccatggttttcaagtgtttttgaatctctaaga
ccatacttaaagccaagtataatgaatacttctcctaagtctgttttggacagtgttgcc
aactcagataaatcaaatgcaattgttgagggtggagcgactaatgagtctgatccattt
tctaagaatctgcttgacatgtcctgtcatgaagttcttgaaatcaatgacactagtgat
gatgctcctcatgactgtggatattctgttgggccaaatagtgctactttggatagcatt
gttatgcctaatagaaactcaagcatagagattgatgctttggttcaaaacaatgtctgt
gcagaagtatctgaagaaaatgctgcttttcaccctttaactcctccctgctccccttct
aatgctgcagacaatattttccccatctcacatgatcacttgaagaaggagaatcatggg
agctgtaaaagaccatccaataacctctcgggtggttctgaaagacaagttgccgagaga
tacattagcaagatgtctggtgcgaggaaagctgcattcatgaaattctttcctcagagc
gaatctccttcggacaagaagagaaagaaggtggattcattgcagtgtaagaaagacgag
tcaagtgtttcaaagaaatcaaaccgtgtttctgtttcccaccctgtgacagctggaaca
tctaagtga
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