KEGG   Lotus japonicus: 130740249
Entry
130740249         CDS       T04348                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
lja  Lotus japonicus
Pathway
lja03020  RNA polymerase
lja03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    130740249
  09124 Replication and repair
   03420 Nucleotide excision repair
    130740249
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lja03021]
    130740249
   03400 DNA repair and recombination proteins [BR:lja03400]
    130740249
Transcription machinery [BR:lja03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     130740249
  RNA polymerase III system
   RNA polymerase III
     130740249
  RNA polymerase I system
   RNA polymerase I
     130740249
DNA repair and recombination proteins [BR:lja03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      130740249
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 130740249
NCBI-ProteinID: XP_057448761
LinkDB
Position
2:82094155..82096878
AA seq 144 aa
MADEDYDDVDMGYEDEPVEPEIEEGAEEDLENKNEEEENGGEPLETEEKEEAQPVQRPRK
TSKYMTKYERARILGTRALQISMNAPVMVELAGETDPLEIAMKELRERKIPFTIRRYLPD
GSYEDWGVDELIVEDSWKRQVGGD
NT seq 435 nt   +upstreamnt  +downstreamnt
atggccgacgaagactatgatgatgttgacatggggtacgaggatgagcctgtagagcct
gagattgaggaaggtgcagaggaggatttggagaacaagaatgaggaggaagaaaatgga
ggagaacctcttgagactgaggagaaggaagaggcacaaccagtgcagaggcctcggaag
acgtccaagtatatgaccaagtatgagagagccaggattttgggtacccgtgctcttcaa
atcagcatgaatgcacctgtcatggttgagttggccggggaaactgacccacttgagatt
gccatgaaggagcttcgagagcggaaaataccgtttaccatccgtcgctacttgcctgat
ggaagttatgaagattggggagttgatgagctgattgtggaagactcatggaagaggcaa
gtgggtggtgattga

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