Lotus japonicus: 130740302
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Entry
130740302 CDS
T04348
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
lja
Lotus japonicus
Pathway
lja03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130740302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130740302
03036 Chromosome and associated proteins [BR:
lja03036
]
130740302
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130740302
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130740302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
130740302
NCBI-ProteinID:
XP_057448834
LinkDB
All DBs
Position
2:82589958..82593903
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AA seq
574 aa
AA seq
DB search
MVAFGSQTSMSNGTSSTGVFRAPQASYPCPSTPGFGCCSPSSPIGRSSLYGQKTGFGRFA
STDTQTSLFGGATQPSQPAFGSSSSTPFGASTGTPAFGATSTPAFGVTSTPAFGSTSSPT
FGNNGNAFGVPSAPVFGGGGAFRASSNPLLTSAFYIPPFGCSSTSAFSTSRSTPFGVSIA
STPACGASSTPACGACSTPANGASSTPSFSFGPTKAFGQSSSTFGSSSPFGSTTSPFGGQ
SSAFGSPAPTPAFGSTGFGHQPGGSGVASYSATTEADSGTFGQTAKFESISAMPVYKDKS
LEELRWEDYQLGDKGGPLPSAHSTGMAAFSSSTIQTSPFSPSQVFGQTSTNPSSNPFAQR
PQNSLFSTPTSGGTSAAHFFKPSDPIFFGYPQPSFIPAAPTNAQPTSTFGQNTPFGQTAS
FGQSNLFNSPVSGLAGNIFSTSPSLTSTAQPISTPFQFQPPQVAPSSGTFGFSNFGQTQP
VFGGSCCNCTRGMFGQNNGGTPGMFGQNNGGTPGMFAQNNGGTPGMFAQNNFAFPSSRQS
SMVAQPAPATDPLAALRALQASFADLSIFCVVRL
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggtggcatttggttcacaaacttccatgtctaatggtacttcttccactggtgtattt
cgtgcaccacaagcctcttatccctgcccttcaactccgggattcggttgttgttcgcca
tcatcaccaattggtagatcatccttatatggtcagaagactggttttggacgttttgcc
tcaactgatactcaaacaagtctatttggaggtgccactcaaccatcacaaccagctttt
ggaagcagttcctcaacaccttttggtgcatcaactggcacacctgcatttggagcaacg
agcacccccgcttttggtgtaactagcacccctgcatttgggtcaacctcaagcccaact
tttggtaacaatgggaatgcatttggtgtgccaagtgctcctgtgttcggaggtggggga
gcatttagggcgtcaagtaaccctctgcttacatctgcattttacatccctccgtttggt
tgttcaagtacgtctgcatttagcacttcaagaagtactccatttggggtctctatagct
agtactcctgcttgtggtgcttctagtacccctgcctgtggtgcttgtagtacccctgct
aatggtgcttctagtaccccttcttttagttttggccccacaaaagcttttggtcagtct
agttctacatttggtagtagcagcccatttgggagtacaacctcaccctttggaggtcag
agttctgcatttggatctccagctccaactccggcttttggaagtactggttttggacac
caaccgggtggaagtggagtagctagttactcagcaacaactgaagcagattctggaacc
ttcggacaaaccgcaaaattcgagtccatatcagccatgcctgtttacaaagataaaagc
ctagaggagctaagatgggaggactatcaattgggagataaaggtggaccactaccctct
gctcactcaactggtatggcagcctttagttcatctacaatacaaacaagccccttttct
ccttcacaagtgtttggtcaaacatcaaccaatcctagttctaacccatttgctcagcgg
ccacagaattctcttttttctactccaacatctggtggaacttcagctgctcatttcttc
aaaccatcagacccaattttttttggctatcctcagccatcctttatccctgcagcccct
acaaatgcacagccaacttctacttttggacagaataccccctttgggcagactgcatct
tttggtcaatcaaacttgttcaactcaccagtgtcagggcttgctggaaatattttttca
accagtccgtcactcacttctacagcgcaacccatctcaacacctttccaattccaacct
ccacaagttgctccttcaagtggtacatttggctttagcaactttggccagacacaacct
gtatttggtggaagttgctgcaattgcacacgaggaatgtttggccagaataatggtggc
actccaggaatgtttggtcagaataatggtggcactccaggaatgtttgctcagaataat
ggtggcactccaggaatgtttgctcagaataattttgcatttccgtcttctcgccagagt
tctatggttgcacaaccagcacctgctacagatccattggcagcacttcgtgctttgcaa
gcttcttttgctgatctttctattttttgtgttgttcgtttgtag
DBGET
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