Lotus japonicus: 130740361
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Entry
130740361 CDS
T04348
Name
(RefSeq) rab escort protein 1
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lja01006
]
130740361
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130740361
Prenyltransferases [BR:
lja01006
]
Protein prenylation
Rab geranylgeranyltransferase
130740361
Membrane trafficking [BR:
lja04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130740361
Endosome - Lysosome transport
Rab GTPases and associated proteins
130740361
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDI
RAE1_2_domI_C
Motif
Other DBs
NCBI-GeneID:
130740361
NCBI-ProteinID:
XP_057448929
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All DBs
Position
2:83138952..83144390
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AA seq
548 aa
AA seq
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MGQDEEALSYPPIDPVNYDLIIVGTGLSESIIAAAASAVGKTVLHLDPNSFYGSHFASLS
IDEFTSYLNSPPTSIPTAAASGDSDYAVVDLVRQPLCSDAEIVSHDETTFLRENSRKFNL
DLGGPRALFSADKTIDLLLKSGAAMYLEFKGIDATLVYEANGGLVDVPDSRGAIFRDKNL
SLKEKNQLMRFFKLVQQHLGDNQDEKISEEDMESPFVSFLEKMRLPPKIKSFLLYAIAML
DYDQENSEVCKDVFKTKDGIDRLAQYSSSVGRYPNAPGALLYPTYGEGELPQAFCRRAAV
KGCIHVLRMPVISLLIDKVTGLYKGVRLASGQDLYSHQIILDPCFTIPSPLSLSPGDFPS
ERLQMLSLRDIKGMVARGICITRNSIKPDVSNCSVVCPPRSLYPEQVTSIRALQLGSNVA
VCPAGTFVLYFSTLCNDADEGKKLIKAAMDALLTLPGCGNSENIPIVQSDSADVKPNVLW
SALYIQKLTTSKFEFISSTSTPDGNLNYNDILDATEKLFGQMYPNEEFFPQTTSPEDNTD
ENGVTLDD
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgggccaagacgaagaagccttgtcttaccctccgattgacccggtgaactacgatctc
atcatcgtcggcacaggcctatcggaatccatcatcgctgcagccgcttccgccgtcgga
aagacagtcctgcacctcgaccccaactccttctacggcagccacttcgcttctctctcc
atcgacgaattcacctcttacctcaactcccctcccacatccatccccaccgccgccgca
tctggcgattccgattacgccgtcgtggacctcgtcaggcaaccactatgctccgacgcg
gaaatcgtttcgcacgacgaaaccacgtttctgcgagaaaattcgaggaaattcaatctc
gatttgggagggcctagggcattgttcagcgcggataagaccatcgatctgttgttgaag
tccggtgcggcgatgtacttggagttcaaaggcatcgatgcgacgctcgtctacgaagcg
aatggcggattggtcgacgtgccggattctcgcggcgcgattttcagagataagaacctc
tcgctgaaggagaagaaccaattgatgagattcttcaagctcgttcagcaacacctgggt
gataatcaagatgagaaaatctcggaggaagatatggagagtccgtttgttagtttcttg
gagaaaatgcggttgccgccgaagataaaatcgtttcttttgtatgctatagctatgtta
gattatgatcaagagaatagtgaggtttgtaaggatgtatttaaaacaaaggatggaata
gatcgtctagcacaatacagctcatctgttggaaggtatcccaatgcaccaggggctttg
ctttatcctacttatggtgaaggagaacttccacaagctttttgtcgccgtgctgctgtc
aaaggttgcatccatgttctcagaatgccagtcatttctctgcttattgataaggttact
gggctttataaaggtgttagattagcttcaggtcaggatttatacagccatcaaataatc
ctagacccatgctttacaattccttccccattatcgttatctcctggagattttcccagt
gaaaggctccaaatgttgagtctgagagatattaaaggaatggtcgctaggggaatatgc
atcacaaggaattccataaagccagatgtatctaattgctcggtggtgtgtcctcctaga
tcattgtatccggaacaggtgacatcaatcagagctcttcagttaggatcaaatgttgct
gtttgtcctgcgggcacctttgttttatacttttccactttgtgcaatgatgccgatgaa
ggaaagaagttaataaaagcagccatggatgcccttcttacactgcccggatgtggaaac
tctgaaaacattcccattgttcaaagtgatagtgcagatgtaaaacccaatgtgctctgg
agtgcactgtatattcagaaattgactacgagtaaatttgaatttatcagctccacttct
acgccggatggaaatctaaactacaatgacattttagatgcaaccgagaagctatttggt
caaatgtaccccaatgaagaattctttccacagacaacatcacctgaagacaacacagac
gaaaatggggtaactctggatgactaa
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