Lotus japonicus: 130740369
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Entry
130740369 CDS
T04348
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like
KO
K04523
ubiquilin
Organism
lja
Lotus japonicus
Pathway
lja04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130740369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130740369
03051 Proteasome [BR:
lja03051
]
130740369
Membrane trafficking [BR:
lja04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
130740369
Proteasome [BR:
lja03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
130740369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
UBA_7
TBK1_ULD
Ubiquitin_2
Dsc3_N
OTU1_UBXL
Rad60-SLD_2
Ubiquitin_5
GerD
Motif
Other DBs
NCBI-GeneID:
130740369
NCBI-ProteinID:
XP_057448940
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All DBs
Position
2:complement(83199392..83205039)
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AA seq
536 aa
AA seq
DB search
MGGGEAAAEGTTETNTTDGVNVNINIRCSNGSKFTVQITLDSTVGSFKEAVASNCDIPTD
QQRLIYKGRILKDDQTLQSYGLEADHTVHLVRGFAASNATGGTNTSGANTTTTNTRGAGA
NEGGGGLGGPGLGASLFPGLGVNGMAGSGLSGLFGANLPDLEQIQQPFLNNPNMVREIMN
TPAMQNLINNPEIVRNLIMNNPQMQELMDRNPELAHILNDPSTLRQTLEATRNPEIMREM
MRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMAGNTGNDGVRNQSTNPSTTNSE
ATSPVPNTNPLPNPWSSTGTGGAQGNTRRPTAGGDARQQALTGLGGLGVPDLEGMMGGMP
DPAMLTQLMQNPAISQMMQSILSNPQTMNQILGLNTEQRGMPDLNSLRDVMQNPEFLRLF
SSPETLQQLMSFQQSLMSQVGQQQPTPGEPGQTGGGTGSLNNMGLEMLSSMFGGLGAGSL
AVPNRSNEPPEQLYATQLSQLQEMGFFDTQENIRALIATSGNVHAAVERLLGNTGQ
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtggtgaagctgccgctgaaggtaccacggagacgaacaccaccgacggtgtc
aacgtcaacatcaacattcgctgctccaatggttccaagtttaccgttcagattaccctc
gattccaccgtcggatccttcaaggaggcggttgcctccaactgcgacatccctaccgat
cagcagcgtctgatttacaagggtcggatcctcaaggatgatcaaaccctgcagagctat
ggtttggaggcagaccatactgttcatttggttcgtggttttgcggcttccaacgctact
ggcgggactaatactagtggggctaataccacaacaactaatacgagaggtgctggtgct
aatgaaggtggtgggggtttaggagggcctgggcttggagcttcgttgttcccgggacta
ggtgtcaatgggatggcaggcagtggccttagcggcttatttggagcgaaccttccagat
cttgaacaaattcagcagccctttttgaataatcccaatatggtcagagaaataatgaac
accccggctatgcagaatttgataaacaatcccgagatagtgcgcaatcttataatgaat
aacccacagatgcaagagctcatggatagaaaccctgagctggcacacatacttaatgat
cccagcacacttcgccagacacttgaagctacaaggaaccctgagatcatgcgcgaaatg
atgaggaatacagacagagccatgagcaacattgagtcttctcctgagggattcaacatg
ctgaggcgcatgtatgaaaatgttcaagaaccatttttaaatgccactacaatggctggt
aatacaggaaatgatggtgtcaggaatcaatcaactaatccctcaacgactaattctgaa
gcaacttcccctgttccaaatactaacccacttcctaatccttggtcctccactggaact
ggaggtgcacaaggcaacaccagaaggccaactgctggtggggatgctcggcagcaggca
ctcactggactaggaggacttggtgtgccagatcttgaaggcatgatgggtggtatgcca
gatcctgctatgttgacccaattaatgcaaaatccagctatttcacaaatgatgcagagt
atcctttccaatccacagactatgaatcagattcttggtctcaatactgagcagcgtggc
atgcctgatctaaactcactaagagatgtgatgcaaaacccagagtttcttcgcttattt
tcctcacctgagacactgcagcaactcatgtctttccagcaatctcttatgtctcaagtt
ggccagcagcaaccaacaccgggggaaccaggtcaaaccggtggaggcactggatcattg
aacaacatggggttggagatgttatcaagcatgtttggtggacttggagctggtagctta
gctgttccgaacagatcaaatgagccaccagagcaattgtatgccacccaactttcccag
cttcaagagatggggttctttgacacgcaagagaacataagggctcttatcgctacgtca
gggaatgttcatgcagcagttgagcggcttttggggaacactggacagtag
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