Lotus japonicus: 130740534
Help
Entry
130740534 CDS
T04348
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
lja
Lotus japonicus
Pathway
lja04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
130740534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lja04121
]
130740534
Enzymes [BR:
lja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130740534
Ubiquitin system [BR:
lja04121
]
Ubiquitin ligases (E3)
U-box type E3
130740534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
MLKL_N
Neurochondrin
zf-RING_UBOX
zf-Nse
zf-C3HC4_4
KAP
Arm_2
zf-C3HC4_2
MCAfunc
HEAT_EF3_GNC1
zf-C3HC4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
130740534
NCBI-ProteinID:
XP_057449166
LinkDB
All DBs
Position
2:complement(86928293..86933321)
Genome browser
AA seq
671 aa
AA seq
DB search
MEVVVEVEIAGSVIELVNEIASISDFRPMVKKQYCNLARRLKLLVPLFEEIRDMKDPITD
ETSKSMLAFKEALESAKELLKFGCEGSKIYMVLERDQIMNKFYEVTARLEQSLNGISYDK
LDISDEVKEQVELVLAQFRRAKGRVDEPDVKLYEDILSLYNDSSDAATDPAVLSRLAEKL
QLMGIADFIHESLTLHDMVGASGGDPGARIEKMSMLLKKIKDYVQTENLVKDDNVGAKGL
PSSVSRLGSIEKNHPALVIPTDFKCPISLELMQDPVIVSTGQTYERSCIEKWLQAGHGTC
PKTQQSLTSTVLTPNYVLRSLIEQWCEANGIEPPKRPSTSQPSKSASACTPAERSKIENL
LQKLSSGNPEDQRLAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSVPDSRTQEHAVTA
LLNLSIYENNKGCIVSSGAVPGIVHVLRKGSMEARENAAATLFSLSVVDENKVTIGSSGA
IPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVIPTLMKLLTEPSGGMVDEA
LAILAILSSHPDGKAAIGAADAVPILVEFIGNGSPRNKENSAAVLVHLSSGDQQYLAQAH
KLGLMTPLLELAQHGTDRGKRKAAQLIDRMSRFLEQQRQQQEQVEEVQTQTEPQAQNEDI
EPPSISNLDDT
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggaggttgttgttgaggttgagatagctggctcggtgattgagctggtgaatgagata
gctagcatctctgacttcagacctatggtgaagaagcagtactgcaacttggcacgcagg
ttgaagcttctcgtgcctttgttcgaggaaattagggacatgaaagatcccatcactgac
gaaacttcgaaatccatgcttgcttttaaggaagctcttgaatctgcaaaggagcttctc
aaattcggatgtgaaggcagcaagatttacatggttcttgagagggaccaaatcatgaac
aaattctatgaggtgacagctcggctggaacaatcattgaatggaatttcctatgataaa
cttgacatttctgatgaagttaaggagcaggttgaattggttcttgcccagtttagaaga
gccaaaggaagggttgatgaacctgatgtcaagttgtatgaggatatattgtccctttac
aatgatagtagtgatgcagctacagatccagctgttcttagccgattagctgaaaaattg
caattgatggggatagccgattttattcatgaatctctcacattacatgacatggtggga
gcgagtggtggggatccaggggcacgcatcgagaagatgtcaatgttattgaagaagata
aaggattatgtgcaaactgaaaacctagtcaaggatgataatgttggagcaaaaggcctt
ccttcaagcgttagcagattagggtcaatcgaaaagaatcatccggcccttgttatccct
actgattttaaatgtccgatttccttggaattgatgcaggatcctgtcattgtttcaaca
ggacagacttatgagcgttcttgtattgagaagtggttgcaagctgggcatgggacatgc
ccaaaaacacaacagagtctcactagtactgttctcacacccaactacgtgttacggagc
ctcatagaacaatggtgtgaagccaatggcatagagccaccaaaacgacccagcacctct
caacctagcaaatcagcatcagcctgcaccccagctgagcgaagtaagattgaaaatctt
ctccaaaagctctcatctggtaatcctgaagaccagagattagctgctggtgagatccgc
cttcttgcaaagcgcaatgcagataatcgggtcgcaattgctgaagctggagcaatacct
ctccttgttggtctcttgtccgtgcccgactctcgcactcaagagcatgctgtgacagcg
cttttgaatctttccatatatgagaataacaaagggtgcattgtgtcttctggagcagtc
ccaggtatagttcatgtgctgaggaaaggaagcatggaagcccgtgaaaatgcagcagca
acacttttcagcctttcggttgtggacgaaaacaaggttacaattggttcttcaggagcc
ataccgccgctagtgacgctgctgagtgaaggtacccaaaggggtaagaaagacgctgca
acagcactcttcaatttgtgcatttaccagggtaacaaaggaaaggcggtgagggcgggt
gttattcccacactgatgaaactgctgacagaaccaagtggaggaatggtggacgaagca
ttggccattttggcaatcttgtctagtcatcctgatgggaaggctgcgattggtgctgca
gatgcggttccaattttggtagagtttattgggaatggatcgccgaggaacaaagagaac
tcagctgctgttttagtgcacctttcttctggtgatcaacaatatctagcacaagcacac
aaactagggttgatgactcctttgttggaactggctcaacatggtacagatagaggcaaa
agaaaggcggcacaattgatagatcgcatgagcaggtttcttgagcagcagaggcagcag
caggagcaggtggaggaagttcaaacacaaactgaacctcaagctcagaatgaggatatc
gaaccaccttcaatttctaaccttgatgatacctga
DBGET
integrated database retrieval system
