Lotus japonicus: 130740629
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Entry
130740629 CDS
T04348
Name
(RefSeq) structural maintenance of chromosomes protein 1-like
KO
K06636
structural maintenance of chromosome 1
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lja03036
]
130740629
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
130740629
Meiosis-specific proteins
Cohesin complex and associated proteins
130740629
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
130740629
NCBI-ProteinID:
XP_057449272
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Position
2:87768969..87776794
Genome browser
AA seq
1189 aa
AA seq
DB search
MASLQSPGKIHRLEMENFKSYKGFQLIGPFHNFTAIIGPNGAGKSNLMDAISFVLGVRTS
HLRGAQLQDLIYAFDDREKEQTGRKAFVRLVYRLADNNTEIQFTRTITSAAASEYRIDGN
VVTLDIYNARLKSLGILVKARNFLVFQGDVESIASKNPKELTGLIEQISGSDEHRREYEQ
FEEEKTAAEEKLALAYQKKKTVVMERKQKKEQKEEAEKHLRLQAELKSLKKEHFLWQLLN
VENDIKKTTEDLADERNSREGVKEELVNLKNEARKKEKEQAKYLKEIALGEKKIAERSNK
LDKSQAGLLKMKEEMIRIDSKIKKGKKELDKKREDRRRRAADIEELQRGIRDLTAKMADL
EEKSRGVGGQVKLDGGDLKEYFRVKEEAGMKTAKLREEKELLDRQQHADTEAQKNLEENL
QQLRSRESELNSQEEQTRARLKEILGSSAVNKDGLANLKKELRVMQDKHRNSKAKYENLK
MQIGELENQLRELKADRNENERSAKLSQAVETLKRLFQGVHGRMTELCRPTQKKYNLAVT
VAMGKFMDAVVVEDEKTGKECIKYLKDQRLPPQTFIPLQSVRVKPIMERLRTLGGTAKLV
FDVIQFDPSMEKAILFAVGNTLVCDDLMEAKVLCWDGEGFRVVTLDGILLTKSGTMTGGT
SGGMEARSKQWDDKKIEGLKQKKVQYESELEELGLIRDMHLKESEASGKISGLEKKIQYA
EIEKRSISDKLSNLNQEKETMKEMIESMTPDLHKLNGAVDKRNAELRKLEKKINEITDQI
FEDFSKSVGVANIREYEENQLKDAQNVADERLNLNSQLSKLKYQLEYEQNRDMSSQIQEL
ESSLSALENDLKLVQNKEAEAKLAAENATENINQLKGEVEEWRSKSEDCEKEIQEWNKKV
SAATTNISKLNGLIISKEAQIEQLMAQKQETLDKCELEQISVPPVISDPMDQRSRPLKDR
NKIEAEFKEKISTLISEIERTAPNLKALEQYEVLLEKERGVIEEFEAVRKDEKEKTNKFN
AVKERRYELFMDAFNHISGNIDKIYKQLTKSHTHPMGGTAYLNLENEDDPFLHGIKYTAM
PPTKRFRDMDQLSGGEKTVAALALLFSIHSYRPSPFFILDEVDAALDNLNVAKFAGFIRS
KSCDDGNGFQSIVISQKEKFFDNADALVGVCRDSTRGCSGTVTFDLSGR
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgctacagtcgccggggaaaatccaccgcttggagatggagaatttcaagtcg
tacaagggcttccaactgatcggtcccttccacaacttcaccgccatcatcggccccaac
ggcgccggaaaatcgaacctcatggacgccataagcttcgtgctcggcgtcaggaccagc
cacctccgcggcgcgcaactccaggaccttatctacgccttcgacgaccgtgagaaggaa
cagaccggacgcaaagccttcgtccgcttggtctaccggcttgcagacaacaacaccgag
atccaattcacccgaaccatcacctccgccgctgcaagcgagtaccgcatcgacggcaac
gtagtcactttggacatctacaacgccaggctcaaatcgcttggtattcttgtgaaggct
cgcaatttcttggtgtttcagggcgatgttgaatcgattgcgtcgaagaatccgaaggag
cttactggcctaattgagcagatttctggctctgacgagcacaggagggagtatgagcag
tttgaagaagaaaaaaccgctgctgaggagaaattggcactcgcttaccagaagaagaag
acggtggttatggagaggaagcagaagaaagaacagaaggaagaggcagagaaacatctt
cgcctgcaggcggagctgaaatcgttgaagaaggagcatttcctgtggcagttgttgaat
gtagagaatgatatcaagaaaacaactgaggatcttgcagatgagaggaatagtcgtgaa
ggcgttaaggaagaactggtgaatttgaagaatgaagctaggaagaaggagaaggagcag
gctaagtatctgaaagagattgcgctaggcgaaaagaaaattgctgagagaagcaacaaa
cttgacaagagtcaagctgggcttctgaagatgaaggaggaaatgattcgtatagattcg
aagattaagaaggggaagaaggaacttgataagaaaagggaagatcggaggaggcgtgct
gctgatatagaggagctacaaaggggcatccgggatcttactgcgaaaatggcggactta
gaggaaaagagccgaggtgttggtggtcaggttaagttagatggcggtgacttgaaagaa
tattttagagttaaggaggaagctgggatgaaaactgcaaagcttagggaggaaaaagag
cttttagataggcagcaacatgctgatactgaagctcaaaagaatttggaagaaaatctt
caacagttgcgaagccgggagtctgaattgaattcacaggaagaacagacgcgggcaagg
cttaaagaaattcttggtagttctgcagtaaataaggatggccttgcaaacttgaagaaa
gaactgcgtgtgatgcaggacaaacatcgcaattccaaggcaaagtacgaaaatttgaag
atgcagattggcgaattagaaaatcaactacgggaactaaaggctgacagaaatgaaaat
gagagaagtgctaaactatctcaggctgtggagactctgaagcgcctgtttcaaggagtc
catggtcgcatgactgaactttgtaggccaacacagaagaagtataacctagctgttact
gttgctatgggtaaatttatggatgcagttgtagttgaggatgaaaagactgggaaggaa
tgcatcaagtatttaaaggatcagaggcttcccccgcagacatttattcctctgcaatct
gttcgtgtgaagccaataatggaaagattgcgcacattagggggtacagcaaaactggtt
tttgatgtgattcagtttgatccctccatggagaaggcaattctctttgctgttgggaat
actcttgtttgtgatgatcttatggaggccaaagttttatgctgggatggtgaggggttc
agagttgtaactttggatggaattctgcttacaaaatccggcacaatgactggtggcact
agtggtggaatggaagcgaggtcaaaacagtgggatgacaagaaaattgaaggacttaaa
caaaagaaagtgcagtatgaatcagagttggaagagctaggattaatcagagatatgcac
cttaaagagtccgaagcatctggaaaaattagtggattggaaaagaaaattcaatatgct
gagattgaaaagcgaagcattagtgacaaactttcaaatttgaaccaagaaaaagagacc
atgaaagaaatgattgaaagtatgacgccagatcttcacaagttaaatggtgctgttgac
aaaaggaatgcagaattacgtaagctcgagaagaagataaatgagatcactgatcagatt
ttcgaagactttagcaagtcagttggggttgcaaacatccgtgagtatgaagaaaatcaa
ctcaaggatgctcaaaatgtagcagatgagaggctgaacctgaatagccaactttcaaaa
ttaaaatatcagttggagtatgagcaaaatagggacatgagttcacaaattcaagaactg
gaatcttctctaagtgctttagagaatgacttgaaactggtacagaacaaagaggctgaa
gcaaagttagcagctgagaatgctactgaaaatattaaccagcttaagggtgaagttgaa
gagtggagatcaaagtcagaggactgcgaaaaggaaatccaagagtggaacaagaaggtt
tctgcagcaacaacaaacatatccaagcttaatggtctgataatttccaaggaggcacag
attgagcagttgatggcgcaaaagcaggaaacattagacaagtgtgaactggaacagatt
agtgttcctccggtcatttcagatcctatggatcaacgcagcaggccactgaaagatagg
aataaaattgaggcagaatttaaggaaaaaatcagtacgttaatatctgagattgaaaga
acagcaccaaatttgaaggcattggagcaatatgaggttctgctagaaaaagaaagaggt
gtaattgaagaatttgaagctgtcaggaaagacgagaaggaaaaaacgaataaattcaat
gcagttaaagagaggaggtatgagttgttcatggatgctttcaaccatatatctggtaat
atagataaaatttacaaacagcttacaaagagccacacacatcctatgggtggaacagca
tacctgaatttggaaaatgaagatgatccatttctacatggcatcaagtacactgctatg
cccccaacaaagcgctttcgcgatatggatcagctatctggtggggaaaagactgttgct
gcccttgcgttgctattctccatccacagttataggccatcgccgttttttatattggat
gaagtcgatgctgcattggacaacttgaatgttgctaagtttgctggatttattcgttca
aaatcttgtgatgatggaaatggttttcaaagtatcgtgatatcacagaaagagaagttt
tttgacaatgctgatgcgctagttggagtttgcagggattctacaagaggctgttcagga
actgtcacatttgatctaagtggacgttag
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