Lotus japonicus: 130741040
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Entry
130741040 CDS
T04348
Name
(RefSeq) DNA mismatch repair protein MSH4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lja03036
]
130741040
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Meiosis-specific proteins
Others
130741040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
DNA_primase_S
AAA_29
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
130741040
NCBI-ProteinID:
XP_057449791
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Position
2:complement(91962553..91971332)
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AA seq
792 aa
AA seq
DB search
MEDDGGESSSFVVGIIENRAKEVGIAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPI
VIIVPPNKSASNSTAAVTDFIDRFYGSVKKVVVARCCFDDTKGAILIKSLAAKDPSALGL
DTYYKQYYLCLAAAAATLKWTETEKGVVVTNHSLSVTFNGSFDHMNIDATSVQNLEIIEP
FHSALLGTNNKKRSLFHMLKTTKTIGGTRLLRANLLQPLKDIETISARLDCLDELMSNEQ
LFFALCQVLRKFPKETDRVLCHFCFKPKKDTIEALAVDRAKKSQMLVSSVILLKTALDAL
PLLSKVLKDAKSSLLSNIYKSVCANEKYDRIKERIGEIIDEDVLHARVPFVACTQQCFAV
KAGIDGLLDISRRSFCETSEAIHNLANNYREEFKLPNLKLIFKNRQGFHFVIPQKNVQGK
LPSKFIQVVKHGNNIHCSTLELASLNARNKSAAAECYTRTEVCLEELMDAIRENVSVLTL
LAEVLCLLDMIVNSFAHMISTKPVDRYTRPEFTENGPMAIDSGRHPILESIHNDFVPNNI
FLSEASNMVIVTGPNMSGKSTYLQQVCLIVILAQVGCYIPARFSTLRVVDRMFTRMGAVD
NLESNSSTFMTEMKETAFIMQNVSHRSLVVMDELGRATSSSDGFAIAWSCCEHLLSLKTY
TIFATHMENMAELATIYPNVKILHFHVDLKNNHLDFKFQLKEGPKHIPHYGLLLAEVAGL
PSPVIENARMITSRISEKEMRRMKVNCLQYHSIQRAYHVAQRLLCLKYSNQDEDTIRQAL
RNLKETCLNHKL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgacggtggagagagttcgagcttcgtcgtcggcatcatcgagaatagagcg
aaagaggttggaatagctgcttttgacttgagatcagcttctctgcacctttctcagtat
attgaaactagcagttcctatcaaaacacaaagacattgctgcatttctatgatcccatt
gtgatcattgttcctccaaacaagtcagcatccaactctacagctgcagttacagatttt
attgatagattttatggttcagtcaagaaggtagtggttgcccgttgttgttttgatgac
acaaagggcgctatcttaataaaaagccttgctgctaaggatccttcagcacttggtttg
gacacttattacaagcagtattatctctgtttggctgctgctgccgccaccctaaagtgg
acggaaacagaaaaaggagttgttgttacaaatcactcgttgtcggtcactttcaatgga
tcatttgatcacatgaatattgatgcaaccagcgtccaaaatttggaaattatcgagcca
tttcattctgccctactgggaacaaacaacaagaaaagaagtctgtttcacatgctcaag
acaactaaaactattggagggaccaggctccttcgtgccaatctgttgcagcctctaaaa
gacattgaaacaatcagtgctcgtcttgattgcctagatgaactgatgagcaatgaacaa
ctatttttcgccctctgtcaggttttgcgtaaatttccaaaagagactgatagagtatta
tgccacttctgctttaagccgaagaaagatacaattgaggccctagcagttgatcgtgct
aaaaagagtcaaatgcttgtctcgagtgtaatcctccttaaaactgctttggatgccctt
cctttactgtctaaggtgcttaaggatgcgaaaagctcccttctttcaaatatctacaag
tcagtttgtgcaaatgaaaaatatgatcgtattaaggaaaggataggggagattattgat
gaagatgtgcttcatgcacgggttccttttgttgcttgcactcagcaatgctttgctgtc
aaggcagggattgatggtctcttggatatttcacgaagatcgttttgtgaaaccagtgaa
gccatccacaatcttgcaaacaattatcgagaggaattcaagttgcccaatctaaagctt
atctttaaaaacaggcagggattccactttgttataccacagaagaatgttcaaggaaag
cttccaagcaagtttattcaggttgtaaaacatgggaacaacattcattgttcaactctg
gaactagcatctttgaatgctaggaataaatctgcagctgcagaatgctatacaagaaca
gaggtttgtctggaagaacttatggatgccattcgtgagaatgtctctgtgttgacactg
cttgctgaggtgctctgcttgttggatatgattgtgaattcatttgcacatatgatttcc
acaaagcctgttgatagatatacaagaccagaatttacagagaatggaccaatggcaatt
gattctggtagacatccgatcctggagagcatacacaatgactttgtacccaacaatata
tttctgtctgaagcctcaaatatggtgattgtgaccgggcccaatatgagtggaaagagt
acttaccttcaacaagtgtgtctcatagtcattcttgctcaagttgggtgttatattcct
gcccgcttctcaactctgagggtggttgatcgtatgtttacgaggatgggtgcagttgat
aatcttgaatcaaactcgagcacattcatgacagagatgaaggagacagctttcatcatg
caaaatgtctcacataggagtctggttgttatggatgaacttgggagggctacttcatcg
tctgatggatttgcaattgcatggagttgctgcgagcatcttttgtcacttaaaacgtat
accatatttgccactcatatggagaacatggcagaattagctacaatctatcccaacgtg
aaaattcttcactttcacgtcgacttgaaaaacaaccatttagacttcaagtttcaactt
aaagaaggaccaaagcatatcccccattatggccttctcttagcagaagtggcaggatta
ccaagtccggttattgagaatgccagaatgatcacatctaggatttcagagaaggaaatg
aggaggatgaaagtcaattgcttgcaatatcattctatacagagggcatatcatgttgca
caacgcttattatgcctgaaatattctaatcaagatgaggacacgattcggcaagctttg
cgaaatcttaaggaaacctgcctcaaccataagctttga
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