Lotus japonicus: 130741061
Help
Entry
130741061 CDS
T04348
Name
(RefSeq) protein transport protein SEC16A homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130741061
Membrane trafficking [BR:
lja04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
130741061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
130741061
NCBI-ProteinID:
XP_057449820
LinkDB
All DBs
Position
2:complement(92147852..92155648)
Genome browser
AA seq
1430 aa
AA seq
DB search
MASNPPFVMEDQSDDEDFFDKLVEDDMEPVKASRPVEGNDSDDAKAFGNLGISDADAAAF
ESLDTGESGVVELQGELEPVKSDVALVDGHGQEGNSLLASSSVASESKKDPGNDGSELVS
APAVSESDKSSSSEVKEVGWNSFYADSNGGIGLGSYSDFFSELGDQSTDFPGNASDNLNR
EVNRGNEGQSDGFNTSVKHLQDQKVPSYDTSFEYPTNKQDDGLSTSVNYGQYQEGQAYDA
SSDAHTNGQDLTGQNWDDLYPGWKYDHATGQWYQIDGNNATGTAQQCSEAIPAVDSAVSS
DGKTEISYMQQTAQSVPGTLAETGTAESVSTWSQVSQGNNGYPEHMVFDPQYPGWYYDTI
AQEWRSLETYSSSVQPSVHGLEHGHVSTSTFSPNDSSLYSGHNHANNFGSSQGTSSQAAD
GSWSGLQGVNHQQGIDMYTAETTAKREDYITSGIYQQVNHSYGSSISETKDQQNTSSSFG
SVALYNKVNHDHGFANGTFEPKSFVPSGNIGQQFNYSSTKFDEQKKFSNEFAGNQKPFSY
SYQSSPDGYHSQYAPDVGRSSAGRPAHALVTFGFGGKLIVMKDPSALSSSYGNQKESVQG
SISVLNVMEVVSESIGSSNIGNYSGDYFRALSQQSFPGPLVGGSVGSKELYKWLDERIAC
CKSPDMDYKNGDRLRLLLSLLKIACQHYGKLRSPFGTDTILKESDTPESAVAKLFASSKL
SGTEFTHPQYGKPSHCLQNLPSEGQMMAMASEVQNLLVFGKKKEALQCAQEAQLWGPALV
LASQLGEQFFVDTVKQMALCQLVVGSPLRTLCLLIAGQPAEVFSMDSSTSGHPGAFHMPQ
QSAQVGSNGMLDDWEENLAVISTNRTKGDELVIIHLGDCLWKERSEITAAHICYLVAEAN
FESYSDSARLCLIGADHWKCPRTYASPEAIQRTELYEYSRLLGNSQFILHPFQPYKLIYA
YMLAEVGKVSESLKYCQAVQKSLKTSRAPEEEMWKQLALSLEERIRTHQQGGYAANLAPA
KIVGRLLNFFDSTAHRVVGGLPPPAPSSSQGTVHGSEQQYQHMASKVVSSSQSTMAMSSL
VPSASMEPTSEWTADNNTMAKSVSEPDIGRSPRQETASPPDAQGKAQVSGGTSRFPRFGF
GSQLLQKTVGLVLRPRSGKQAKLGEKNKFYYDEKLKRWVEEGAEPPTEEAALPPPPTTAF
QNGSAEYNLKSALKTEGVTPNEGSIVRTGPELGPGMPPMPPSSNQFSARSRLGVRSRYVD
TFNQGGGNSANLFQPPSVPSVKPVLPANAKFFVPAPAPSSNHNTMEAIAESNQEDSTANE
DPSTSSTNDWSYQPPKHVSAVAMQKFPSMGNISKQGATGGSNSHFANSRRTASWSGNVND
AFSPPTVRETKPLGDALGMPPWTFIPNQSSSMHPTMKSSSFGEDLQEVEL
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaatcctccattcgtcatggaggatcagtcggatgatgaggatttttttgat
aaactggttgaggatgatatggagcccgtgaaggctagtcgtcctgttgaagggaatgat
tctgatgatgctaaggcgtttgggaatctgggtatcagtgatgctgatgctgctgcattt
gagagtttggatactggtgaaagtggggtagttgaactccaaggggaactggaacctgtg
aaatctgatgtggctttggttgatggacatgggcaggaggggaattcattacttgcttct
agttcagtagcgtctgagagtaagaaggatcctggtaacgatggatcagagttagtgtct
gctccagctgtaagtgagagtgataaaagctctagttcagaggtaaaggaagtgggttgg
aattctttttatgctgattcaaatggaggcattgggcttggatcatattctgactttttc
agcgagttgggagatcagtctacggattttccagggaatgcatctgataatttaaatagg
gaagtgaaccgtggtaatgaaggtcaaagtgatggcttcaatacttcagttaagcacttg
caagatcaaaaggttccaagttatgatacaagttttgaatatccgacgaacaagcaagat
gatggcttaagtacttcagttaattatgggcagtatcaagagggtcaagcttatgatgca
tcttcagatgcacacacaaatggacaagatcttactggtcagaattgggatgatctttat
cctggttggaagtatgatcatgccactgggcaatggtatcaaatagatgggaataatgct
acaggcactgctcagcaatgctctgaagctattccagctgtggattcggctgtttcttca
gatggaaaaacagagatctcttacatgcaacaaactgctcagtctgttcctggaacttta
gctgaaactggtacagctgagagtgtatctacctggagtcaggtttcacaagggaataat
ggctatccagaacatatggttttcgatcctcagtatcctggttggtattatgacacaatt
gctcaagaatggcgctcattggaaacttatagttcatctgttcagccttctgttcatgga
cttgaacatgggcatgtatctaccagtactttctcacccaatgatagtagtttgtatagt
gggcataaccatgcaaataattttggttcttcacagggcaccagtagccaggctgcagat
ggaagctggagcggtttgcagggtgttaaccatcagcagggtattgacatgtacacagct
gaaactactgccaaaagggaggattatataacatctggtatttaccagcaagttaatcac
tcttatggttcaagcatttctgagaccaaagaccaacaaaatacctctagttcctttgga
tcagttgcgttgtacaataaagtaaaccacgatcatggttttgctaatggaacttttgaa
ccaaaaagttttgttcctagtgggaacatcggtcagcagtttaattattcaagcacaaag
tttgatgaacaaaagaaattctcaaatgagtttgctggaaaccagaagccctttagttat
tcctatcaatcaagcccggacgggtatcacagtcagtatgcccctgatgttggaagatcg
tcagctggacgtcctgctcatgccctggtaacctttggatttggtggaaaactcattgta
atgaaggatccgagtgctttgagctcatcatatggaaaccagaaggaatctgtacaaggt
tctatttctgtgttgaacgtgatggaagttgtctcagagagcattggttcttcaaatatt
ggaaattatagtggggattatttccgtgctctgagtcagcaatctttcccaggtccattg
gttggtgggagtgttggaagtaaggagctgtacaagtggttagatgagaggattgcttgc
tgcaaatcaccggacatggattataagaatggtgataggttgagactccttctctccttg
cttaaaatagcttgtcaacattatggaaaactacgttctccttttggtacggacaccata
ctaaaagaaagtgatactcctgagtcagcagtcgctaaactttttgcatcttccaagttg
agtggcacagagttcactcaccctcagtatggaaagccaagccattgcttgcaaaacttg
ccttcagaagggcaaatgatggcaatggcttctgaggtacaaaatcttcttgtctttggc
aaaaagaaggaggctttacaatgtgcacaagaagcacaactgtggggacctgcgcttgtt
cttgcttcccaacttggtgaacagttctttgttgatacagtgaagcaaatggcgctttgc
cagctagttgtagggtcacctctgcgcactttatgccttctaattgctgggcaaccagct
gaagtattctctatggatagctcaaccagtggacatccaggtgcttttcatatgcctcaa
cagtctgcacaggttggatctaatgggatgcttgatgattgggaggagaatctagctgtc
atatctacaaacagaaccaaaggagatgaacttgtaattattcaccttggtgattgtttg
tggaaggaaagaagtgagattacggctgcacacatatgctatttagttgctgaagcaaac
tttgagtcatattcagacagtgcaagactttgtttaattggagctgatcactggaaatgt
cctcgaacttatgctagtccagaagctatccagaggaccgagttatatgaatattctagg
ttgctgggaaattctcagtttattttgcatccatttcaaccatataagcttatatatgca
tatatgctagctgaagtgggaaaggtttcggagtcattgaagtactgccaagcagtacaa
aagtccttgaaaactagccgtgctccggaagaagaaatgtggaaacaattggcattatct
cttgaggagagaattagaactcaccagcagggtggatatgctgcaaatttggctcctgca
aaaattgttggtagattgcttaacttttttgatagcactgcacatcgagttgttggtggt
ttaccaccacctgctccatcatcatcacaaggaactgttcatggaagtgagcaacagtac
cagcatatggcatccaaagtagtatctagtagccaatcaaccatggccatgtcatcttta
gttccatctgcttcaatggaacccacaagtgagtggacagctgacaacaatacaatggca
aaaagtgtttcagagccagatattggccgaagcccaagacaggaaacggcttcaccacct
gatgcacaaggaaaagctcaggtttcagggggtacatctcgctttcctcgttttggtttt
ggctcacaacttttgcaaaaaacagtggggttagtcttgagacctcgctctggtaaacag
gctaaattgggcgagaaaaataagttctattatgatgaaaagctgaagagatgggttgag
gaaggtgccgaacctccgactgaagaagctgcactgccaccacctccaacaactgcattc
cagaatggttcagctgaatacaacttgaaatctgcattgaagacagaaggtgtgactcct
aatgagggctctattgtaagaactggtcctgaacttggtccagggatgccaccgatgcca
cctagttcaaatcaattctctgcccgcagccgcttaggtgttcggtcaaggtacgttgac
accttcaaccaaggtggtggaaactctgcaaacttgtttcagcccccttctgttccatct
gtgaaacctgttcttcctgccaacgctaaatttttcgttcctgctcccgcaccatcatca
aatcacaacacaatggaggctatagcagaaagcaaccaagaagatagtacagctaatgaa
gatccttcaacatcttccacgaatgattggtcataccaacccccaaaacatgtatcggca
gtggccatgcaaaagtttccaagtatggggaacatctcaaaacagggagcaacaggtggt
agtaactctcattttgctaattcacgtcgaacagcttcatggagtgggaatgttaatgat
gcatttagccctccaacagtgcgtgaaactaagccgttgggggatgctttgggcatgcca
ccgtggacattcattcctaatcagtcttcttcaatgcatccaactatgaaaagtagcagt
tttggggaagatcttcaagaggttgaactttga
DBGET
integrated database retrieval system
