KEGG   Lotus japonicus: 130741270
Entry
130741270         CDS       T04348                                 
Name
(RefSeq) RNA-binding protein Y14
  KO
K12876  RNA-binding protein 8A
Organism
lja  Lotus japonicus
Pathway
lja03013  Nucleocytoplasmic transport
lja03015  mRNA surveillance pathway
lja03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130741270
  09122 Translation
   03013 Nucleocytoplasmic transport
    130741270
   03015 mRNA surveillance pathway
    130741270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lja03019]
    130741270
   03041 Spliceosome [BR:lja03041]
    130741270
Messenger RNA biogenesis [BR:lja03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     130741270
Spliceosome [BR:lja03041]
 Complex C
  Other components
   EJC/TREX
    130741270
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 130741270
NCBI-ProteinID: XP_057450102
LinkDB
Position
2:complement(93939666..93942376)
AA seq 203 aa
MQGGGAAEGEALDFEPEDDDLMDEDGAPDADASPPHPKLKSAITSGAAPSLSAPKKTKGR
GFRQETDTNRNNRLSGSDFDSLTTEGGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEY
GEIKNLHLNLDRRTGFVKGYALIEYERAEEAKNAIENLNGSELLTQNIYVDWAFSSGPIN
ESIRRKNARPTRDRRSRSPRRRY
NT seq 612 nt   +upstreamnt  +downstreamnt
atgcaaggaggaggcgccgccgagggagaagctcttgatttcgaaccggaggacgatgac
ctcatggacgaggacggcgctcctgacgccgacgcttctccgcctcaccccaagctcaaa
tccgccatcacttccggcgctgctccctccctctccgcccctaaaaagaccaagggccgt
ggtttccgccaggagactgacaccaaccgcaacaaccgcctctccggctctgatttcgac
tctctcaccaccgagggtggtcctggccctcagagatccattgaagggtggattattctg
gtcactggagttcacgaggaagcgcaagaggatgatttgcaaaacgcctttggtgaatac
ggggagattaagaacctgcatttgaatctcgatcgtcgcactggtttcgtcaaaggttat
gcactgattgaatatgaacgtgctgaggaagctaaaaatgccatagagaatttgaatgga
tctgagcttcttacccaaaacatttatgtcgactgggctttcagcagtgggcctattaat
gagtcaatcagaagaaagaatgctaggccaactcgtgatcggcgctccaggagccctcgc
aggagatattga

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