Lotus japonicus: 130741462
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Entry
130741462 CDS
T04348
Name
(RefSeq) protein CHROMATIN REMODELING 25
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
lja
Lotus japonicus
Pathway
lja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130741462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lja03400
]
130741462
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
130741462
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SWI2_SNF2
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
130741462
NCBI-ProteinID:
XP_057450377
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Position
2:complement(95509071..95519471)
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AA seq
863 aa
AA seq
DB search
MKTRMEEEEELEEDEVASCSSDSDDLEVEQRKSQNVEALIGGNLIVKRQSLLPRVLRVEG
AAVCRKPFKPPSSKPYNHQDLTRRLSARKRFVPWRSSPIPRPPLLELNLNLNLNLNLDVA
EDDEHLPPEIDPLVLWHPQHCEDGASTSNLTTISVVPLLVRFLRPHQREGVQFMFDCVAG
LCSTPNIHGCILADDMGLGKTLQSITLLYTLLSQGFDGKPMVRKAIIVTPTSLVSNWEAE
IKKWVGERVRLVALCESTREDVVSGIGNFTSPRSNLQVLIVSYETFRMHSSKFSSSGSCD
LLICDEAHRLKNDQTITNRALAALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGDIA
HFRRYYEAPIICGREPTATTEEKKLSAERTTELSAKVNQFILRRTNALLSNHLPPKIVQV
VCCKLTPLQSDLYKHFLQSKNVKRAINEELKQSKILAYITALKKLCNHPKLIYDTLRSGS
PGTSGFEDCIRFFPPEMLSGRSGSWTGGNGAWVELSGKMQVLARLLAHLRQRTNDRIVLV
SNYTQTLDLFAQLCREQRYPHLRLDGTTSISKRQKLVNCFNDTSKDEFVFLLSSKAGGCG
LNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQRQMSKE
GLQKVIQREQTDSLLEQGNFLSTEDLRDLFTFDENLKSEIHEKMRCSRCRIIDEPQSSDV
LSTIVNSESDEETSDIGGFAEIAGCLENLKGSEKQIGTPLEEDLSSWGHHFSPTSVPDPI
LQASAGDEVTFVFTNQVNGKLVPMESIISRQLEQKEPNKPRQNIKQKFTPLKLAFNTNHT
HVNNKVLPQKRSYPDHANGDDLE
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgagaatggaggaagaggaagagttagaggaagatgaagtggcatcgtgttct
tctgactccgatgatcttgaagttgaacaacggaaatcgcaaaatgtggaagctctcatc
gggggcaacctcatcgtgaagagacaatcgttactaccgcgagttcttagggtagaggga
gcggccgtttgcagaaaaccctttaaacctccatcctctaaaccttacaatcatcaagac
cttacgcgtaggctttctgctcgcaaaaggtttgtcccatggcgctcttcacctattcct
agaccacccctcttggagttgaatttgaatttgaatttgaatttgaatcttgatgttgct
gaggatgatgagcatttgcctcccgagattgatcctctagtactgtggcaccctcagcac
tgtgaggatggggcttctacttccaatttgacaacaatatcagttgtccctttgcttgtt
cgtttccttcgtccacatcagagagaaggggttcagtttatgtttgattgtgttgccgga
ctatgtagcacaccaaatatacatggatgcattttggcagatgatatgggtttgggcaag
acattgcagtctatcacattactttatactcttctttctcaagggttcgatgggaagcca
atggttagaaaagccatcattgtgactcctactagccttgtcagcaattgggaagccgaa
attaagaagtgggttggagaaagagttcgtctcgttgctttatgtgaaagcactagagaa
gatgttgtctctgggattggcaattttacaagtccccgaagcaatttacaggtgctcatt
gtttcatatgagacgttccgaatgcactcatcaaagtttagctctagtggctcctgtgac
ctcctcatctgcgatgaggctcacagactaaaaaatgatcagacaattacaaaccgggca
ctggctgctctcccatgcaaacgtagagttttgctgtcaggaactcctttgcaaaacgac
ttagaggaattctttgcaatggttaattttactaatccaggaatattgggtgacatagca
cattttcgacgttactatgaggctccaattatttgtggaagagaacctactgccaccaca
gaagagaagaagctaagtgctgaacgcacaactgaattaagtgccaaagttaatcagttc
atattaagaaggactaatgcattattatcgaatcacttaccaccaaagatagttcaagtt
gtttgctgcaagttgactccacttcagtcagacctatataaacattttctacaatccaaa
aatgttaaacgggcaattaacgaagaactgaagcaatcaaagattttggcctacataaca
gctctcaaaaagttatgcaatcatccaaagctcatatatgataccttacgaagtgggagt
ccaggaacttcaggttttgaggattgcattcgatttttccctccggaaatgttatctgga
aggtctggatcatggacgggtgggaatggagcctgggttgagctatccggtaaaatgcaa
gtcttagcaagattgcttgctcatctacgccagagaacaaatgatcgcattgtccttgtt
tcaaactatactcagacacttgatctttttgctcaattgtgtcgggaacaaaggtaccct
cacttgaggcttgatggcaccacatcaatcagtaaaaggcagaagttagtaaactgcttt
aacgacacatcaaaggatgaatttgtttttctcttaagcagcaaggctggtggttgtgga
ctcaatcttattggtggaaatcgactcgtcttatttgatcctgattggaacccagcaaat
gataaacaagctgcagcaagagtgtggagggatggacagaagaaaagagtttacatttat
agatttttgagtgccggaacaatagaagaaaaggtctaccagcgtcagatgtctaaagaa
gggctgcaaaaggtcattcagcgggagcaaaccgatagccttctagaacagggtaacttt
ctttcgacagaggatcttcgcgatttgtttacttttgatgagaacctcaagtcagagatt
catgaaaagatgcgatgcagtcggtgccgaataattgatgagccgcaaagctctgacgtc
ctatcaacaatagttaatagtgaatctgatgaagaaacctctgatataggtggatttgca
gaaattgcaggctgtttagagaatttaaaaggatcagagaagcagattgggaccccactg
gaagaagatttaagtagttggggccatcatttttccccaacttctgtaccagatcctatc
cttcaggcttcagctggtgatgaggtgacttttgtgtttacaaaccaagttaacggaaag
ctggtacccatggagtccataatcagtcgccagctagagcaaaaggaacctaataagcca
aggcagaacatcaaacaaaaattcactcccttgaaattagcatttaatactaaccacact
catgtaaataataaagtattaccacagaaaagatcgtatcctgatcatgccaatggtgat
gatcttgagtaa
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