Lotus japonicus: 130742434
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Entry
130742434 CDS
T04348
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
lja
Lotus japonicus
Pathway
lja04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130742434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lja04121
]
130742434
Enzymes [BR:
lja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130742434
Ubiquitin system [BR:
lja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
130742434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-RING_UBOX
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
130742434
NCBI-ProteinID:
XP_057450525
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All DBs
Position
1:complement(68168728..68173472)
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AA seq
309 aa
AA seq
DB search
MAPGGGVFKEVLESHLLSSDYETGKAKSEAKSSSTFPKSSVGSTGKNEISSKNGVYDLLK
CPVCKNLMYPPIHQCPNGHTLCSNCKIEVHNICPTCDHDLENIRCLALEKVAESLELPCK
YQSLGCHDIFPYYTKLKHEQSCGFRPYNCPYAGSECSVMGDLPTLLAHLKDDHKVDMHDG
CTFNHRYVKSNPHEVENATWMLTIFNSFGRHFCLHFEAFQIGTAPVYMAFLRFLGEDSEA
KKFSYSLEVGANGRKLTWQGIPRSIRDSHRKVRDSQDGLIIQRNLGLYFSGGDRQELKLR
ITGRIWKEE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggctcctggaggcggtgttttcaaagaagttcttgaatctcacctgctgtcttcagat
tatgaaacaggcaaagctaaatctgaggccaagagttccagtacatttccaaaatctagt
gttgggtcgactggaaagaatgaaattagttcaaagaatggcgtgtatgacttactcaag
tgtcctgtctgcaagaatttgatgtatcccccaattcaccagtgcccaaatggccataca
ttatgttccaattgtaagattgaagtccataatatctgcccaacctgcgaccatgatctt
gagaatataaggtgtttggctttggagaaagtggcagaatctttggagcttccttgcaaa
tatcagagcctaggttgtcatgatatattcccatactatactaagcttaagcatgagcag
agttgtggatttcgtccatacaattgcccatatgctggatctgagtgctctgtgatgggt
gaccttcctactctccttgcccatctaaaggatgatcacaaggttgacatgcatgatgga
tgcaccttcaatcatcgatatgtcaaatcaaatccacatgaagttgagaatgccacatgg
atgctaactatttttaatagttttgggagacacttctgcttgcactttgaggcattccag
attggcacagctccagtttacatggcctttttgcggtttttgggtgaggacagtgaagca
aagaaattcagctacagcttggaagttggcgcaaatggccgcaagcttacatggcaagga
attccgaggagcattcgtgacagtcatcggaaagttcgagatagtcaagatggtcttata
attcagaggaaccttggcctttatttttctggtggggatagacaggagttgaagctgaga
atcacaggtcgtatatggaaagaagaatga
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