Lotus japonicus: 130742536
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Entry
130742536 CDS
T04348
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
lja
Lotus japonicus
Pathway
lja03082
ATP-dependent chromatin remodeling
lja03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130742536
03083 Polycomb repressive complex
130742536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lja03036
]
130742536
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
130742536
Histone modification proteins
HAT complexes
HATB complex
130742536
HDAC complexes
Sin3A-HDAC complex
130742536
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
130742536
PRC2.2
130742536
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
130742536
Heterochromatin formation proteins
Other heterochromatin formation proteins
130742536
Chromatin remodeling factors
NuRD complex
130742536
NuRF complex
130742536
NuRF complex (fruit fly)
130742536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
eIF2A
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
DUF3915
Kre28
Motif
Other DBs
NCBI-GeneID:
130742536
NCBI-ProteinID:
XP_057450615
LinkDB
All DBs
Position
3:complement(2801419..2807638)
Genome browser
AA seq
496 aa
AA seq
DB search
NVREIQILVPISLSLHKNNTVQFTREREREREMEEEKVKEKEQERNAVEQRYTQWKSLVP
VLYDWLANHNLVWPSLSCRWGPQLEHATYKNRHRLYLSEQTDGTVPNTLVIANCEVVKPR
VAAAEHISQFNEEARSPFVKKFKTILHPGEVNRIRELPQDGKIVATHTDSPNVLIWDVES
QPNRQAVLGAPTSRPDLVLTGHKDDAEFALDMCPTEPFVLSGGKDKCVVLWSIHDHISTL
GVEAGSTTPKQGSGSKVTGNSEKTTESPSVAPRGIYKGHTDTVEDVQFCPSSAPEFCSVG
DDSRLILWDARVGSTPVAKVEKAHDGDLHCVDWNPHDINFILTGSADNTVHMFDRRKFNN
RGLGSPVHKFKGHDAAVLCVQWCPDKSSVFGSAAEDGILNIWDYEKVDTTGSAADPKGSD
NPPGLFFRHAGHRDKIVDFHWNASEPWTIVSVSDDCGSTGGGGTLQIWRMIDLIYRPEEE
VLDELDKLQSQITGSN
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
aatgtgcgggaaatacaaatactagttccaatctctctctctcttcacaagaacaacaca
gttcagttcaccagagagagagagagagagagagaaatggaggaggagaaagtgaaagag
aaagagcaagagaggaacgcggtggaacaacgctacacacagtggaaatctctcgttccc
gttctctacgactggctcgctaaccacaacctcgtctggccttcactctcatgccgatgg
ggtcctcaactcgaacacgctacctacaagaaccgccaccgtctctatctctctgaacag
actgacggcactgttcccaacactctcgtcatcgctaattgcgaggttgttaaacctagg
gttgctgctgctgaacacatttcacagttcaatgaagaagctcgctctccctttgtcaag
aagttcaaaactattctgcatcctggtgaggtgaacagaatcagggaactcccgcaagat
ggtaagatagtagccacacacacagatagtcccaatgtactgatttgggatgttgaatct
caacctaatcgtcaggctgttctaggggctcccacttcccgccctgacctggtattgact
gggcataaggatgatgctgaatttgcactggatatgtgtcctactgagccctttgttctt
tccggagggaaggacaagtgtgtggtcctatggagtattcatgatcatatttcaacttta
ggggtagaagcaggatccaccactcctaaacagggatcgggatctaaagttacgggcaat
agtgagaaaactacagaaagcccttcagttgctcctcggggcatctacaagggtcataca
gacactgttgaggatgtgcaattttgcccatcaagtgcaccggagttctgtagtgttggt
gatgattctcgtctcatactctgggatgcacgagttggatcaactccagttgccaaggtt
gagaaggcgcatgatggagatcttcattgtgttgattggaatcctcatgatataaatttt
attctgactggttctgctgataatacggttcacatgtttgatcgccggaaatttaacaat
cgcggacttgggtctcctgttcataaatttaaaggtcatgatgctgcagtcctctgtgta
cagtggtgtcctgacaaatcatctgtatttggaagtgctgctgaagatggcattttgaac
atctgggactatgagaaggtggatacaacaggttcggcggctgatccaaaaggatcagat
aacccccctggtttattctttcgacatgctgggcatagggacaagattgttgacttccat
tggaatgcttctgagccatggacgattgttagtgtctctgatgattgtggaagtactggt
ggaggtggcaccctacagatatggcggatgattgatctgatttatcgacctgaggaggag
gtgctggatgaacttgataagctccaatctcaaattactggaagtaattga
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