Lotus japonicus: 130743044
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Entry
130743044 CDS
T04348
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lja03021
]
130743044
Transcription machinery [BR:
lja03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
130743044
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
ATG11
Motif
Other DBs
NCBI-GeneID:
130743044
NCBI-ProteinID:
XP_057451137
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Position
1:complement(68623950..68628586)
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AA seq
514 aa
AA seq
DB search
MGVVTVSSSAARSPLGLNTKFSSHHSALKRHLIVAFKGDKPNDSALVANREKNPMAIEMA
RTQRKRIGKTSKVPKKARAVTQETSPSSLDVDYSEAAAILENIYKLSPASDTEDCKDRKI
KRVSRRGRRVGEDSEEKEVKNDRVVRNKNMKAKRLSLNERIAMKKNESGDVDVVIPTRKK
RNVQNRVEKIDELVREYSGTTDLASLDWKKMRIPAVLPSSEHAWLFKLMQPMKVFLQVKD
SLQKEQGREPTEGEIADATNMNVSQVKKAIEVGRAARNKLIKHNLRLVLFVINKYFADFA
NGPRFQDLCQAGVKGLITAIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLSSFTRVPFGLE
SVRAEIRRAKAELTVELQRQPTEEEILEKVQISPERYHDVMKASKPVLSLHSRHKTTQEE
LINGVVDDEGVNGDNRKQPALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGEIAG
NLNISREMVRKHEVKALMKLKHSARLDYLRRYVV
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttctagctcagctgctcggtctccattaggattgaataccaag
ttttccagtcaccattccgcactgaagagacatttaatcgtagcgtttaaaggtgataag
ccgaatgactcagctttggttgcgaatcgagaaaaaaatcccatggcgattgaaatggcc
aggacgcagaggaaaaggataggaaaaactagtaaagtacctaagaaagcgagagctgtt
acacaggaaacttcaccgtcttcattggatgtagactacagtgaagctgctgccatactt
gaaaatatatacaaactcagtcctgcatctgatactgaagactgcaaagatagaaaaatt
aaaagagtctcccggaggggaaggagggtcggcgaagacagtgaagaaaaagaggtaaag
aatgatagggtagtcaggaacaagaatatgaaagcaaaacgattgagtcttaatgagagg
attgcaatgaaaaagaacgaaagtggggatgtagatgtagtcattccaactcgaaagaag
agaaatgttcaaaacagagtcgagaagattgatgaacttgttagggaatattcagggaca
actgatctagccagtttggactggaaaaaaatgagaatacctgcagttcttccttcttca
gaacatgcttggttgttcaaattgatgcaacctatgaaggtatttcttcaagtgaaggat
agtttacagaaggagcaaggaagagaaccaacagagggggaaatagctgatgcaacaaac
atgaatgtctctcaagtcaagaaagcgatagaggttggccgagctgcaagaaacaagctc
ataaagcacaacctccggcttgtcttgtttgtgatcaacaaatattttgcggatttcgct
aatggaccaaggtttcaagatctttgtcaggcaggggttaagggacttattactgcaatt
gatcgttttgagccaaaccggagatttcggctatctacatacagtttgttttggataaga
catgctatcattcgttccatgaccctctcaagcttcacacgtgttccctttggacttgaa
tcggttagagcggagatccggagagctaaagccgagttaacagttgagcttcaaaggcaa
ccaacggaggaagaaatactagaaaaagttcagatatcccctgaaagataccacgatgta
atgaaggcttcaaagcccgttctttcgctgcactcgagacataaaaccacacaagaagag
cttattaatggggttgttgatgatgagggtgttaatggtgataatcggaagcaacctgct
ctactaaggcttgctctagatgatgtgcttgattccttgaagcccaaagagagcttggtg
ataaggcagagatttggacttgatgggaagggtgacagaacgttgggagaaatagctggg
aacttgaatatttcaagggaaatggtaagaaagcacgaagtcaaggctctcatgaagctc
aagcattctgctcgattggactatcttcgtcgctatgttgtataa
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