Lotus japonicus: 130743162
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Entry
130743162 CDS
T04348
Name
(RefSeq) translation initiation factor IF-2, chloroplastic
KO
K02519
translation initiation factor IF-2
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
lja03012
]
130743162
03029 Mitochondrial biogenesis [BR:
lja03029
]
130743162
Translation factors [BR:
lja03012
]
Eukaryotic type
Initiation factors
MTIFs
130743162
Prokaryotic type
130743162
Mitochondrial biogenesis [BR:
lja03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
130743162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
EF-G_D2
MMR_HSR1
IF2_N
GTP_EFTU_D2
Ras
Arf
RsgA_GTPase
Roc
Ribosomal_S21e
Motif
Other DBs
NCBI-GeneID:
130743162
NCBI-ProteinID:
XP_057451276
LinkDB
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Position
3:18962780..18971491
Genome browser
AA seq
1008 aa
AA seq
DB search
MLILVGNVQGTMSSLASPVSLGSLTGVSSSGRSHSVVRRVSLSRGNCKKNKKWHCVSFSI
CRYSVTTTDFIADQGNSVSLDSSSDSKGGDSSAGFVLKPPPKPVLKSPGDKGDPILGSGS
WGGSRKTEDSDDVEERNKVIESLGEVLEKAEKLGSPKLDGERNNGSVNKPARPDVNANPR
ADNKPVNSVKTQKSKTLKSVWRKGDTVATVKKVVKEVPRPTSKIEVGKSEIGGEEKVTPQ
SRAPQPPSKPQPMLQSKPSIAPPPIKKPVVLKDKGEAEPTVKSKERKPILIDKFASKKPA
VDPSIAQAVLAPPKPGKAPPPGKFKDDYRRKGAPTGGGPRRRLVADDMIADEDTSELNVS
IPGKTRKGRKWSKASRKAARLQAAKDAAPVKVEILEVDEKGMLVEELAYNLAISEGEILG
ILYAKGIKPDGVQTLDKDMVRMICNEYDVEVIDADPVKVEGLMKKRDILDEGDLDKLKDR
PPVITIMGHVDHGKTTLLDYIRKSKVVASEAGGITQGIGAYKVQVPIDGKPLPCVFLDTP
GHEAFGAMRARGASVTDIVIIVVAADDGIRPQTNEAIAHAKAAGVPIIIAINKIDKDGAN
PERVMQELSSIGLMPEDWGGDIPMVQISALQGKNVDDLLETVMLVAELQELKANPDRSAK
GTVIEAGLDKSKGPFATFIVQNGSLKRGDIVVCGEAFGKVRALFDDGGKRVDVATPSIPV
QVIGLNHVPIAGDVFEVVESLDTARERADSRAESLRNERISAKAGDGKVTLSSLASAVSS
GKLSGLDLHQLNIILKVDLQGSIEAVKQALQVLPQDNVTLKFLLETTGDVSTSDVDLAVA
SKAIIFGFNVKAPGPVKTYADNKAVEIRIYRVIYELIDDVRNAMEGLLDLVEEHITIGSA
EVRATFSSGSGRVAGCMITDGKIQSGCGIRVIRKKKTVHVGTLVSLRRVKEIVKEVNAGL
ECGLGLEDFDDWEEGDFVEAFNTVQKKRTLEEASASMAAAVEGVGVKL
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgcttatattggtggggaacgtgcaaggaacaatgagttctcttgcttccccagtgagt
ttggggagtcttacaggggtgagttcctctgggaggtctcattctgttgtgaggagagtc
tctctttctagagggaactgtaagaagaacaagaaatggcattgtgtgtccttttctatc
tgtagatattcagtcaccacaactgattttattgctgaccaaggcaattcagtgtccctt
gattctagtagtgatagtaaaggtggagatagtagtgctggttttgtccttaagcctcct
cctaagcctgtgttgaagtccccgggcgataagggggaccccattttaggctcaggttct
tgggggggttcaaggaaaactgaggactcggatgatgtcgaagagaggaataaagtgatt
gaatcgcttggagaggtattggagaaggctgaaaagctgggaagtcctaaattggatggg
gaaagaaataacgggtcggtaaataaaccggcaagacctgatgttaatgctaatcctagg
gctgataataagcctgtaaattcagtaaaaacccagaagtctaaaaccttgaagagtgta
tggcgtaaaggggacacagttgcaactgtgaagaaggttgtgaaagaagtgccgaggcct
actagcaagattgaagtggggaaatctgaaattgggggagaggagaaggttacaccgcag
tctcgtgctcctcagcctccttcaaaacctcaaccaatgttacaatcgaagccttctata
gctcccccacccataaaaaaacctgttgtgttgaaggataagggggaagctgaaccaact
gttaaatcaaaagaaaggaagcccatcttgattgataagttcgcatccaagaaaccagca
gttgatccttcaattgctcaagcagttctggcccctccaaaaccagggaaggctcctccc
ccaggaaagtttaaagatgattaccggaggaaaggtgctcccactgggggaggaccaaga
agacgactagtagctgatgatatgattgctgatgaggacacatcagaactcaatgtctct
attcctggtaaaacaagaaaaggaaggaaatggagtaaagcaagccgaaaggcagcaaga
ctccaggcggccaaggatgcagctcctgtcaaagtagaaattcttgaggtcgatgaaaaa
ggtatgctggtggaggagttggcctacaatttggcaatcagcgaaggtgaaatcctgggt
attctatacgctaaggggattaaaccagatggggtacaaactctagacaaagatatggtg
aggatgatttgtaatgagtacgatgttgaagttatagatgctgatcctgtcaaagttgaa
ggattaatgaagaaaagagacattcttgatgaaggtgaccttgacaaactcaaagatagg
cctcctgtcattactattatgggccatgtagatcatggcaagacaacacttttggattat
atacggaagagcaaggtagttgcttcagaagctggtgggatcacacagggaattggggct
tataaagtgcaagtacctattgatggtaaaccattgccttgtgttttccttgacactcct
gggcatgaggcatttggcgcaatgagagcccgtggagcaagtgtaacagacattgtcatt
attgttgtggctgctgatgacggtattcgtccacagacaaatgaagctatagctcatgcc
aaagcagcaggagtgcccataatcattgctataaataagatagataaagatggtgcaaat
ccagaacgagtaatgcaagagctttcttcgattggtttaatgccagaagactggggtggt
gacatcccaatggttcagataagtgctcttcaagggaagaacgtagatgatcttttagaa
actgttatgcttgttgctgagttgcaagaactgaaagctaatcctgatagaagtgcaaag
ggcacagtcatcgaggcagggctagataaatcaaaaggaccatttgctacatttattgta
cagaatggttcccttaaaaggggagatatagtagtttgcggagaagcattcggaaaggtg
cgggctctatttgatgatggtggaaagcgtgttgatgtagctacaccttctatacctgta
caggttattggattgaatcatgttcctattgctggcgatgtatttgaggttgttgagtcc
cttgatactgcacgtgaaagagcagattcccgtgctgagtcattgcgaaatgagcgtatt
tcagcaaaggcaggggatggcaaggtcaccctttcttccttagcttctgcagtttcatca
ggaaagctttctggattagatctgcaccagctaaacattattttgaaggttgatcttcag
ggatccattgaagctgtcaagcaagccctgcaggtgctaccacaagataatgtcacgctg
aagtttttattggaaacaactggggatgtaagcacaagtgatgttgaccttgcggttgca
agtaaagccattatctttggatttaatgtcaaggcaccaggccctgtcaaaacctatgca
gacaacaaagctgttgaaattagaatatatagagttatttatgaattaattgatgatgta
cgaaatgcaatggaagggctcctggaccttgttgaggaacacataacaattggttcagca
gaagtgcgggccacattcagcagtggtagtggtcgtgttgctggatgtatgatcacggac
ggaaagatacaaagtggctgtggtattcgagtcattcggaagaaaaaaacggttcatgtt
ggtactcttgtttccttgagacgggtgaaggagattgttaaagaggtaaatgctggtctt
gagtgcggacttgggttagaggactttgatgattgggaagagggagattttgttgaagcc
ttcaacacagttcagaagaagaggacccttgaagaggcctcagcatcaatggcagctgct
gtggagggagtaggagttaaactatag
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