Lotus japonicus: 130743227
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Entry
130743227 CDS
T04348
Name
(RefSeq) coatomer subunit beta'-2-like
KO
K17302
coatomer subunit beta'
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130743227
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lja04147
]
130743227
Membrane trafficking [BR:
lja04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
130743227
Exosome [BR:
lja04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
130743227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_SPT8
NBCH_WD40
Beta-prop_HPS5
WDR90_beta-prop_4th
PEP5_VPS11_N
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_WDR75_2nd
Beta-prop_DCAF4
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
WD_LRWD1
Beta-prop_IFT122_1st
HEAT_GCN1
TPR_12
TPR_1
TPR_8
TPR_GEMI5
ChlI
Motif
Other DBs
NCBI-GeneID:
130743227
NCBI-ProteinID:
XP_057451353
LinkDB
All DBs
Position
3:complement(1643433..1653996)
Genome browser
AA seq
924 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKCVDLHPTEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV
RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWICTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAIGYLKSSRRVVIGYDEGTIMVKLG
REVPVASMDNSGKIIWAKHNEIQTVNIKSIGVDAEVADGERLPLAVKELGTCDLYPQNLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSTDGEYAVRESTSKIKIFSKNFQ
EKRSVRPTFSAERIFGGTLLAMCSNDFICFYEWAECRLIYRIDVNVKNLYWADSGDLVTI
ASDTSFYILKYNRDVVSSHLDSGRPVDEEGVEDAFELLHEMNERVRTGIWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM
RGDLERASEVLPSIPKDHHNSVARFLESRGMIEDALEVATDPDYRFDLAIQLGRLEVAKS
IAIEVQSESKWKQLGELAMSTGKLEMAEECLKHAKDLSGLLLLYSSLGDAEGISNLATLA
KEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLNK
VNPKAAESLADPEEYPNLFEDWQVALAVESKAIETRNVYPPAEQYISHADKSHVTLVEAF
RNMQIEEEEPLENGDSNYEQTKQDEEDYTEEQEEQNDYNEEQEEQNGEEGSQEEAVVVDA
ESTDGAVLVNGNEADEEWVLAPRH
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcagactcgaaatcaagcgaaagcttgcgcaaagatcagagagagtcaaatgt
gtggatctgcatccaacagagccatggattctggcgagtttatactctggaactgtgtgt
atctggaattaccaatctcagaccatggccaaatcttttgaggttactgagttaccagtt
agatcagccaagtttgttgcacgcaaacagtgggttgttgctggagcagatgatatgttc
atccgtgtctataattacaacacaatggataaagtcaaagtatttgaagcacatacagac
tacattaggtgtgtggcagttcatcctacccttccttatgtgctatcatcatctgatgat
atgctcattaagctttgggattgggaaaagggctggatttgtacccagatatttgaagga
cattctcattatgtcatgcaagtgacatttaatcctaaagatacaaacacctttgccagt
gcatctcttgatcgaaccataaagatctggaatcttggctctcctgaccctaattttaca
ttggatgcccatcagaaaggagtgaattgcgttgattactttacaggtggtgataagcct
tatctaatcactggttctgatgatcacactgcaaaggtatgggattatcagaccaaaagt
tgtgtccagactctagatggtcacacacacaatgtgtctgctgtatgctttcatcctgaa
cttcctataatcattactggttctgaggatggtacagtacgcatatggcactcgacaact
tacaggcttgagaacacattgaactacggccttgaaagagtttgggctattggatacttg
aagagttcacgtcgggttgtgattggctatgacgaaggaacaattatggtcaaacttggt
cgagaagtacctgtggctagcatggacaacagtgggaaaattatttgggctaaacataat
gaaattcagactgtcaatataaagagcataggagtagatgcggaggttgctgatggagaa
aggttgcctttggctgttaaggagttgggcacctgtgatctctacccccaaaatttaaag
cacaatcctaatgggagattcgttgttgtatgtggagatggtgagtatattatatacacc
gcgttggcatggagaaataggtcatttggttcagcactagaatttgtctggtctacggat
ggagaatatgcagtcagggaaagtacatccaagattaaaattttcagcaaaaatttccag
gaaaagaggagtgtccgaccaacattttcagctgaacgaatatttggtggtactttattg
gcaatgtgctcaaatgatttcatctgcttttatgaatgggctgaatgcaggttgatctat
cgcattgatgtcaatgtgaaaaacctctattgggctgatagcggtgatctagttacaatt
gctagtgatacatcattctacatcctgaagtacaaccgtgatgttgtttcatcgcattta
gatagtggaagacccgtagatgaggaaggtgttgaagatgcttttgagctccttcatgaa
atgaatgaacgtgtcaggactggcatctgggttggggattgctttatctacaacaattcc
tcttggagacttaattactgtgttggtggtgaggtaactacaatgttccatttggaccgc
cctatgtacttgttgggataccttgcaaaccaaagtcgggtttatttgattgacaaagag
tttaatgttatgggatacacactgcttttaagcttgattgaatacaaaacacttgtgatg
cgtggcgatttagaaagggccagtgaagttctaccatcaatccctaaagatcatcataac
agtgtggctcgtttcctggaatcacgagggatgatagaagatgctcttgaagtagctact
gacccggactatagatttgatctagcaatacaacttggaagattagaggttgcaaagagc
attgcaatagaagtgcagagtgagtcaaaatggaagcagttgggagagctagctatgtct
actggaaagttagaaatggctgaggaatgtttaaagcatgcaaaggatttgagtggatta
ttactgctgtattcttctttaggcgatgctgaaggaatatcaaatcttgcaacccttgct
aaagagcaagggaagaacaatgtcgcattcctgtgcttatttatgttgggtaaacttgaa
gactgtcttcaactattggtagaaagcaatcggattccagaggcagctttaatggctaga
tcatatctcccaagtaaggtctctgagattgtggcaatttggaggaaagatctcaacaag
gttaatcctaaagctgctgaatctttggctgatcctgaggaatatccaaatttgtttgaa
gactggcaagtcgcccttgctgttgaatctaaagctatagaaacaaggaatgtttaccct
cctgcagagcagtacatcagccatgctgacaaatcacatgtaacccttgttgaagctttc
agaaacatgcagattgaagaagaggagcctcttgagaatggtgactcgaattatgagcaa
actaaacaagatgaagaggactacacagaggaacaagaggaacagaatgactacaatgag
gaacaggaggaacagaatggagaggaaggaagccaagaggaggccgttgtagtggatgcg
gaatcaacagatggtgcagtactcgtcaatggtaacgaggctgacgaagagtgggtgctt
gcaccacgtcactag
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