Lotus japonicus: 130743267
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Entry
130743267 CDS
T04348
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lja
Lotus japonicus
Pathway
lja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130743267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130743267
03110 Chaperones and folding catalysts [BR:
lja03110
]
130743267
03029 Mitochondrial biogenesis [BR:
lja03029
]
130743267
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lja04147
]
130743267
Enzymes [BR:
lja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
130743267
Messenger RNA biogenesis [BR:
lja03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
130743267
Chaperones and folding catalysts [BR:
lja03110
]
Heat shock proteins
HSP60 / Chaperonin
130743267
Mitochondrial biogenesis [BR:
lja03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
130743267
Exosome [BR:
lja04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130743267
Exosomal proteins of other body fluids (saliva and urine)
130743267
Exosomal proteins of breast cancer cells
130743267
Exosomal proteins of colorectal cancer cells
130743267
Exosomal proteins of bladder cancer cells
130743267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
130743267
NCBI-ProteinID:
XP_057451422
LinkDB
All DBs
Position
3:19402533..19407097
Genome browser
AA seq
596 aa
AA seq
DB search
MASTAAGSCNLSSSASISAFPFAGGARRSSSSSSNSVVLSRKTRNLKVSAMAKELHFNKD
GSAIKRLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENI
GAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTTKALVA
ELKKMSKEVEDSELADVAAVSAGNNIEVGSMIAEALSKVGRKGVVTLEEGKSAENALYVV
EGMQFDRGYISPYFVTDSEKMSVEFENCKLLLVDKKITNARDLINILEDAIRNGFPILII
AEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGGTVIREEVGLTLD
KAGKEVLGEASKVVLTKDSTTIVGDGSTQEAVNKRVAQIKNQIEAAEQDYEKEKLSERIA
KLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIK
ATLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNFRYGYNAATGKYED
LMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPVVAGNPMDNSGYGI
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaaccgctgccggctcctgcaacctctcctcctccgcctccatctccgccttc
cccttcgccggcggcgcgagacggagcagcagcagcagcagcaacagcgttgttttatcc
aggaagacccgcaacctcaaggtctccgccatggctaaggagttgcatttcaacaaggat
ggttccgctatcaagaggcttcaggctggcgtgaacaagcttgcggatctggttggtgtt
actcttggtcctaaagggaggaatgttgttcttgagagcaagtatggttcacctaaaatt
gtcaatgatggtgttactgttgctaaagaggttgagttggaggatcctgttgagaatatc
ggtgccaagttggtgagacaggcagctgccaagactaacgatttggctggtgatggaacc
acaacctcggttgtcctagctcagggtcttattgcggaaggtgtcaaggttgttgcagcg
ggtgccaaccctgttcttattacccgtggcattgagaagacaacgaaagctctagtagct
gagcttaaaaagatgtcgaaagaggttgaagatagtgagttggcggatgtggcagcagtc
agtgctgggaacaatattgaagtaggaagtatgatagcagaagctttgagcaaggttggt
agaaagggtgttgtgacacttgaggagggaaagagtgctgaaaatgctctatatgttgtt
gaggggatgcaatttgaccgtggttatatttcaccatactttgttactgacagtgagaaa
atgtcagttgagtttgagaactgtaagttgcttttagttgataaaaagataaccaacgca
agggatcttattaacatacttgaggatgcaattagaaatggtttccctattttgatcatt
gcggaggatattgaacaagaagctttagcgaccctggtggtgaacaaacttagaggatca
ctaaagattgcagcacttaaggcccctgggtttggagaacgcaagagccagtaccttgat
gatattgccattttgacaggaggtactgtgatcagagaagaggttggtcttactttagac
aaagctgggaaagaggttctgggtgaggcctccaaggtggtgcttaccaaggattcaacc
acaattgttggtgatggaagtacccaagaagctgtgaacaaaagagttgcacaaatcaag
aaccagattgaggctgcagaacaagactatgaaaaggaaaagctcagtgaaagaattgca
aaactgtctggtggtgtcgccgtgatacaggttggagcacaaactgagacagaactcaaa
gaaaagaaattgagagttgaagatgctcttaacgccacaaaggcagctgttgaggaaggt
attgtagtaggtggtgggtgtactctgctaagacttgcgtcaaaggtggatgcaatcaag
gctaccctagataacgatgaagagaaagttggagcagatattgttaaaagagctcttagt
taccctctaaaattaattgctaagaatgctggtgtaaatggcagtgttgtgagtgagaag
gttctttctagtgacaattttagatatggatataatgctgccactggtaaatatgaagat
ttaatggctgctggtatcattgatccaacaaaggtggttagatgttgtctggaacatgca
tcctctgtggccaaaaccttcttaatgtcagattgtgtagttgttgagattaaggaacca
gagcctgtagttgctggcaaccctatggacaactcaggatatgggatttaa
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