Lotus japonicus: 130743384
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Entry
130743384 CDS
T04348
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lja01009
]
130743384
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lja03021
]
130743384
Enzymes [BR:
lja01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
130743384
Protein phosphatases and associated proteins [BR:
lja01009
]
HAD phosphatases
Fcp/Scp phosphatases
130743384
Transcription machinery [BR:
lja03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
130743384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
130743384
NCBI-ProteinID:
XP_057451589
LinkDB
All DBs
Position
3:complement(56740413..56746845)
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AA seq
705 aa
AA seq
DB search
MAKDQPVFVKDAVLKLQLSLFEGIRSEDQLFAAGSLISRSDYEDVVTERSITNVCGYPLC
QNGLPSDRPRKGRYRISLKEHKVYDLHETYMFCSSTCVVNGKAFAGTLQDERCPTVDPEK
LNDVLRLFENLNAEPVEDLGKGGDLGLSGLRIQEKTESSTGEVSLDQWLGPSNAIEGYVP
KQRKSDSKSSQKNIKKGSKASRGRLNDEKKSIYSEMDFMSTIITQDEYSVSKVSSGQTDI
TADQQIKPVAKLEVPKKADKVSKDDDSVQDLSSSFKSSLNLSTSEKEKEIDKSDEPVIKS
SLNPSVEKIAVHSSTMSEILDVEQNISERKSIQLQGETSRVAANQNASTSSLDPVNVEGE
FQIEKETGSYKTRPKSSLKSTGKKKLSRSVTWADEKTNSSGSKDLCSVREFGDGDIKKES
DLEGNIDVTDDDEDMIRRASAEACAIALSQASEAVASGDSDITDAVSEAGIIILPSSHDV
VEEGTMEDVDIPETDGVTLKWPRKPGISDFDLFDSEDSWHDPPPEGFSLTLSPFASMWNA
LFSWTTSSSLAYIYGRDVSFHEDFLSVNGREYPCKIILTDGRSSEIKQTLASCLARALPA
VVAELRLPIPVSTLEQGMVCLLDTMSFVDALPAFRMKQWQVVVLLFIDALSICRIPALIS
YMMDRRDLFHKVLNGSQLGMEEYEVLKDLIIPLGKAPHFSSQRGA
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggaccaacctgtttttgtcaaagatgctgttttgaaattgcaattgtccctc
tttgaaggcatccgaagcgaagaccagctttttgcagctgggtctttgatatcgaggagt
gactatgaagatgttgtgactgagaggtccattacaaatgtatgtggttatccactctgc
caaaatggtttaccctccgatcgcccccggaagggtagatatcggatttcgctgaaggag
cacaaagtttatgatctgcacgagacgtacatgttttgttcttccacttgtgttgttaac
ggcaaagcttttgctgggaccttgcaagatgagaggtgcccgactgtggacccagagaaa
ctcaacgatgttctcaggttgtttgagaatttgaatgcggaacctgtggaggatttgggg
aagggtggagatttaggtttgtctggcttgagaatccaggagaaaactgagtccagcact
ggggaggtgtccttggatcagtggcttggaccttcaaatgcaattgagggttatgtacca
aagcaaagaaagagtgattctaagagttctcagaaaaatatcaaaaaagggtccaaagct
agtcgtggcaggttgaatgatgaaaaaaaatcaatatacagtgagatggacttcatgagt
actataattacgcaagatgagtatagtgtttctaaagtatcatcaggtcaaaccgacata
actgctgatcaacaaattaagccagtggccaaattggaggtgccaaaaaaggctgataag
gttagtaaagatgatgatagtgtacaagatctgtcttcatctttcaagagtagtctaaat
ttaagtacctcagaaaaagagaaggaaatagataaatcagatgaacctgttatcaaatcc
tctctcaatccttctgttgaaaagatagctgttcattcttccaccatgtcagaaatactt
gatgtagaacaaaatatttctgaaaggaaatcaatacaactccaaggggaaacaagcaga
gttgctgctaatcagaatgcctccacctccagtttagatcctgtcaatgttgaaggggaa
tttcaaatagaaaaagaaactggatcatacaagactagacccaaatcatctcttaaatcc
actggtaaaaagaaacttagtcgctctgttacttgggctgatgagaaaaccaacagctct
gggagtaaagatctttgttctgttagagaatttggagatggagatattaaaaaagaatct
gatttagagggtaatatagatgttactgatgatgatgaagatatgatacgtcgtgcatca
gcagaagcatgtgcaattgcattgagccaagcatcagaagcagttgcatctggagactca
gatatcactgatgctgtttctgaagctggaatcattatattgccatcttctcatgatgtt
gttgaggaaggtactatggaggatgttgatattccagaaacagatggagttactctgaaa
tggcctagaaagcctggaatttctgattttgacttgtttgactctgaagactcatggcat
gaccctccaccagagggtttcagtttgactttgtcaccttttgcatctatgtggaatgcc
ctcttttcatggacaacatcatcttctttggcatatatatatgggagggatgtaagtttt
catgaagactttctatcagttaacgggagagaatatccttgcaaaattatcttgacagat
ggtcggtcatctgaaataaagcaaactttagccagttgtcttgctcgagctttacctgca
gttgtcgctgagctcaggctgccaattccagtatctaccttagagcaagggatggtatgc
ttgctggatacaatgtcatttgtggatgcacttccagcattcagaatgaaacaatggcaa
gttgttgttcttttgttcattgatgcgttgtccatttgtagaatacctgctcttatctca
tacatgatggatcggagggacttgtttcacaaggttctgaatggttcccaattaggtatg
gaagagtacgaggttttgaaggatctcattattccacttggcaaagcacctcatttctct
tctcaaaggggagcgtga
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