Lotus japonicus: 130744555
Help
Entry
130744555 CDS
T04348
Name
(RefSeq) DNA topoisomerase 6 subunit B
KO
K03167
DNA topoisomerase VI subunit B [EC:
5.6.2.2
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lja03032
]
130744555
Enzymes [BR:
lja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
130744555
DNA replication proteins [BR:
lja03032
]
Prokaryotic type
DNA Topoisomerases
130744555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topo-VIb_trans
HATPase_c_3
HATPase_c
TOM20_plant
Motif
Other DBs
NCBI-GeneID:
130744555
NCBI-ProteinID:
XP_057452714
LinkDB
All DBs
Position
3:complement(59696319..59702783)
Genome browser
AA seq
673 aa
AA seq
DB search
MDGGGSSSESPIKAKKSKSKTPRKPKETILKQKSPAEFFAENKNIAGFDNAGKSLYTTVR
ELVENSLDSAESISVLPVVEVTIEEINRSKFNSMIGLVDRERVDAALYDDYETEKAREKR
LAKEARAQEIQAKNASLGKKGKEASATKGIKGRGEASFYRVTCKDNGKGMPHDDIPDMFG
RVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEISSSMRKQNYISFCRLDIDIHKN
IPHVHLHEKRENNEHWHGAEIQVVIEGNWTTYRSKILHYMRQMAVITPYAQFVFKFMSDA
PDKNVTVSFARRTDVMPPIPLETKHHPSSVDLLLIKRLIAETSKQNLVQFLQHEFVNISK
PYAERLIGELGADFNSKMAVKSLTSQQIVRIHQLFRQAKFDDPSGHCLSPAGEYNLRLGI
IKELHPDMVATYSGSAQVFEGHPFIVEAGVSVGGKDVKQGLNIFRFANRIPLLFEQGADV
VTRTALKRINWSSYKINQIQDKIGVFVSIVSTKIPFKGTGKEYIGDDITEIASAVKSAIQ
QCCIQLKSKILKKMQAREQQERKRNLNRYIPDASSAIYNILNTTPLHASKKLRSGGDEEE
LMRKVSENLITKETLIEKLAKYVEQVDYEMALEYATQSGVSEQPRETIYIQSLEAENKIV
DLHAPFFVFRVVQ
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggatggaggagggagtagcagtgaaagcccaatcaaagccaagaaatccaagtccaaa
acccctcgaaaaccaaaagaaactattctgaagcagaaatcacctgctgagttcttcgca
gagaacaagaacatcgcaggatttgataatgctgggaaatctctttacacaacagttagg
gagcttgtggagaactcacttgactctgcggaatcgatatcggtgcttcccgtggtcgaa
gtaactattgaggagataaacagaagcaaatttaattctatgattggtcttgttgatcgc
gaacgtgttgatgcggcattgtatgacgattatgaaactgaaaaggctcgtgagaaacga
ttagcaaaagaggctcgtgctcaagaaatacaagcaaagaacgcttcccttggaaagaag
ggaaaagaggcttcagctacaaagggtatcaagggtcgaggggaggcttcgttttacaga
gttacatgcaaggataatggaaaaggaatgccacatgatgacatcccagatatgtttggc
cgagttttgtctggtacaaaatatggcctgaagcagacgcggggaaagtttggccttggc
gcgaaaatggcattaatatggtctaaaatgagtactgggcttcctattgagatctcgtca
tcaatgagaaaacaaaattatatttcattttgccggctggatattgacattcataagaat
attcctcatgtacatctacatgaaaaacgagagaacaacgagcactggcatggagctgaa
attcaagttgttatagaggggaactggacaacttaccgttcgaaaatactgcactacatg
cggcaaatggctgtcatcaccccttatgcacagtttgtgtttaaatttatgtcagatgcc
cctgacaagaatgtcactgtaagctttgctcgcagaacagatgtaatgccacccattcct
ctagagacaaagcatcatccatcctctgttgatttgctgctaattaaacgacttattgct
gaaacttcgaagcaaaaccttgtgcagtttcttcagcatgaatttgtgaatatcagtaaa
ccctatgctgaaagattgataggagaattgggtgctgacttcaactcaaaaatggctgtg
aagtctcttacttcgcagcaaatagtacgcattcatcagttgtttcgtcaagccaagttt
gatgatcctagtggtcattgtcttagccctgctggagaatacaatcttcgactaggaatt
ataaaagagctacacccagacatggttgctacctactcaggcagtgctcaagtttttgaa
ggccatccattcattgtggaagctggagtcagtgtaggcggaaaagatgtcaagcaaggt
ctgaatatatttcgatttgccaatagaattccattactttttgagcaaggtgctgatgtt
gtcaccagaactgcacttaagagaatcaattggagtagttacaaaatcaaccagatacaa
gataagattggtgtctttgtgagcattgtgagcaccaaaatcccgtttaaaggaactgga
aaagaatatattggagatgacataaccgagattgcttctgctgtcaagtctgctattcag
cagtgttgcatccaattaaaatcaaagattctgaaaaagatgcaggcccgtgagcagcag
gagaggaaacgaaatctaaacaggtacattcctgacgcttctagcgcaatatacaatatt
ttgaatacgactccgttacatgcatcaaagaagcttcgttctggtggtgatgaggaagaa
ttaatgaggaaagtctcagagaatttgattactaaagaaacgttgattgaaaagctggca
aaatatgttgaacaggtggactatgaaatggcattggagtatgccacccaaagtggagta
agcgagcaacccagagaaacaatatacatacaatcactggaagctgaaaataagatagtt
gacttgcatgctccattttttgttttcagagtcgtacagtag
DBGET
integrated database retrieval system
