Lotus japonicus: 130744641
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Entry
130744641 CDS
T04348
Name
(RefSeq) E3 ubiquitin protein ligase RIN2-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
lja
Lotus japonicus
Pathway
lja04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130744641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lja04121
]
130744641
Enzymes [BR:
lja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
130744641
Ubiquitin system [BR:
lja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130744641
Multi subunit type E3
ERAD complex
130744641
LMBR1L-GP78-UBAC2 complex
130744641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
CUE
zf-rbx1
zf-RING_UBOX
zf-RING_11
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4_4
zf-ANAPC11
zf-RING_16
zf-RING_5
zf-HC5HC2H
U-box_ZFPL1
zf_RING_Vps8_fungal
zf-RING_Vps41
Kazal_1
RING_XB3-XBAT31
RINGv
Motif
Other DBs
NCBI-GeneID:
130744641
NCBI-ProteinID:
XP_057452791
LinkDB
All DBs
Position
3:complement(12436879..12445938)
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AA seq
590 aa
AA seq
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MALRIIAVSAVSTVLSFVGLQFCTDLSLDKLRSDGLIGWNLTQFDNASHDVELDVEVPLG
LYTTIGLLANCLINIFVLLNLCLKAVFFTELYPSETRKLIERLINYVIYKGTFLPLIVPP
TIYQAGLWSTWLIVLCSFKMFQALARDRLDRLNASPSATPWTYLRVYSALLFIFLVDVLW
IRLCLATYTTHASSMFLLLFFEPLSIAFETLQAILIHGFQLLDIWLHHSACHSSDCRMPK
LLDTLTTGSLLEWKGILIRNLGFFLDMATFLMALGHYLYIWRLHGMAFHLVDAVLFLNIR
ALLSAIINRVKGFIKLRIALGTLHAALPDATTEELRTYDDECAICRESMAKAKKLNCNHL
FHLACLRSWLDQGLTEIYTCPTCRKPLFAGRPENETNSSAGVISSDEQLARQMSAGFDRP
NPARHTVPAGFYQNQTLNNAEGVPLRGPGLDSGWLHSWPNQGIDGAGPSTAIRTVGLGRV
QMMMRHLASVGETYAQTAFEDTAWNLWPINPSQASASGSTIPSTGGRLPGGTGSLHIRTP
SRSASDNTANLLAMADTVREVLPHIPDDIIFQDLQQTNSVTVTVNNLLQM
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctttgaggattatagcggtttcagcggtttcaacagtgttaagttttgtgggtctg
cagttttgcacagacttgtcattagataaacttagatcagatggactaattggctggaat
ttaactcaatttgacaacgccagccatgacgttgagcttgacgttgaggtacctttgggt
ctttataccaccatagggctgctggctaattgcctgatcaatatatttgtccttctcaat
ctttgtctcaaggccgtgttcttcacagagttgtatccctctgaaactcgtaaactgatt
gaacgtctcattaattatgtcatttacaaggggacgtttctaccactgattgtgccacca
acaatttatcaggcaggtctttggtcaacttggctgattgtgctttgttcttttaagatg
tttcaagctctagctagagatcgcttagatcggctaaatgcatctccatctgctacaccc
tggacatatcttcgtgtatattcagcactgctattcattttcttggttgatgttctctgg
ataaggctttgtctggcgacatatacaacacatgcgtcctctatgtttctgttactattc
tttgagcctttgagtattgcttttgagaccctacaggccattttgatacatggatttcag
ttgcttgacatatggcttcatcattcagcttgccacagcagtgattgccgaatgcctaaa
ttgcttgatacattaaccacaggttcgttattggaatggaagggaattcttatccggaac
ttgggttttttccttgacatggcaacttttcttatggcgcttggtcattacttgtatata
tggcggctgcatggcatggctttccatctcgtagatgcagtgctatttctgaatatacgt
gcattgcttagtgcgataataaaccgcgtaaaaggctttatcaagctaaggatagctctg
ggaacacttcatgcagctcttcccgatgcaacaactgaagagctaagaacatatgatgat
gaatgtgctatatgtagagagtccatggctaaggctaaaaagctaaactgtaatcacctc
ttccatcttgcatgtttgagatcttggttggatcaaggcctgaccgagatatacacttgt
ccaacatgccgaaagccactttttgcaggccggcctgaaaatgaaacaaactctagtgcg
ggagtaatatctagtgatgagcaacttgcacgccaaatgagtgcaggatttgatcggcca
aaccctgccagacataccgtgcctgcaggattctatcaaaatcagacactgaacaacgcc
gaaggtgttcctctaaggggtccagggctggactcaggttggttgcattcttggccaaat
caaggtattgatggagctggtccatctactgctatcagaacagttggactgggaagagtt
caaatgatgatgaggcatcttgcatctgttggagaaacttatgctcagactgcctttgaa
gatactgcttggaacctctggcctattaatccctctcaggcttctgcaagtggttcaacc
attccttccactggtggaagattgccaggaggaactggtagtttacatataaggacgcct
tcacgttcggcaagtgataatacagcaaatttacttgctatggccgacactgttcgggag
gtcctacctcatattccagatgacataatattccaggacttgcaacaaacaaattctgtc
accgttactgtgaataatcttctccaaatgtga
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