Lotus japonicus: 130744649
Help
Entry
130744649 CDS
T04348
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
lja
Lotus japonicus
Pathway
lja00040
Pentose and glucuronate interconversions
lja01100
Metabolic pathways
Module
lja_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130744649
Enzymes [BR:
lja01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
130744649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
130744649
NCBI-ProteinID:
XP_057452800
LinkDB
All DBs
Position
3:71790645..71792944
Genome browser
AA seq
396 aa
AA seq
DB search
MKGLFSVIFMLFVAATPSLYARVTPNAGSSSFNIVNYGAKGDGQTDDSQAFEKAWHDMCS
ATVGTPTLLIPNGKSFMLQPVLFKGPCKINSIKIELQGTLVAPQSADAWKWPDNNRGGWI
KFSDINGLVISGGGTFDGQGAAWWTKYPKYSDRPSALQFIGCKNLALSATNHINSPRNHI
SIDSCSYSSISNIHINSPEGSPNTDGIDMSKSSNILIKDSTIQSGDDCIAINNGCSFLNI
TGITCGPGHGISVGSLGKDGKFETVEEVHVRNCIFQGTKNGARIKTWQGGSGYARKITFE
NIILNGAKNPIIIDQNYKDFQHNGPAVKVSDVTYRNITGTTVSMEAISLNCDPVGCTDIV
LDHIDITFASAGKSAQSLCKNVNGTFTSCIPIVNCS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtctattttctgtgatttttatgttgtttgttgctgctacacctagcttgtat
gctagagtaacacccaatgcaggatctagcagcttcaatattgtaaactatggggcaaag
ggggatgggcaaactgatgattcacaagcttttgagaaagcatggcatgatatgtgtagt
gcaactgtaggcaccccaactcttctcataccgaacggaaaatcattcatgttacaacct
gtgttattcaagggtccttgcaaaattaacagtattaagattgagcttcagggcactctt
gttgcccctcaaagtgctgatgcttggaaatggccagataataataggggaggatggata
aaattctcagacataaatggccttgttattagcggaggaggaacattcgatggacaaggt
gctgcatggtggaccaagtaccctaaatactctgataggccaagtgcccttcagttcatt
ggctgtaagaatctagcacttagcgcgacgaatcacatcaacagcccaagaaatcacata
agcatagattcttgcagttactctagcatttccaacattcatattaattccccggaggga
agtcctaacactgatgggattgatatgtcaaaatcatctaacatcctcattaaggattct
acaattcaaagtggagacgactgcattgccatcaataatggttgctctttcctaaacata
actggtattacttgtggtcctggccatggcatcagtgttgggagccttgggaaagatgga
aagtttgagacagtagaagaggtacatgtgagaaattgcatcttccaaggaacaaaaaat
ggagctaggatcaagacatggcagggaggatccgggtatgccagaaagataacatttgaa
aatattatactcaatggagcaaagaaccctatcatcattgaccaaaattataaggatttt
caacataatggtcctgcagtgaaagtgagtgatgttacttaccgtaacatcacaggaacc
acagtttccatggaggcaatctcattgaattgtgaccccgttggctgcaccgacattgta
ttagatcatattgacataacctttgcatccgcagggaaaagtgcacagtcattgtgtaaa
aacgttaatgggacattcacttcatgtattccaattgttaactgttcttga
DBGET
integrated database retrieval system
