Lotus japonicus: 130745164
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Entry
130745164 CDS
T04348
Name
(RefSeq) putative DEAD-box ATP-dependent RNA helicase 29
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lja03009
]
130745164
Enzymes [BR:
lja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130745164
Ribosome biogenesis [BR:
lja03009
]
Eukaryotic type
Pre-60S particles
Helicases
130745164
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
130745164
NCBI-ProteinID:
XP_057453289
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All DBs
Position
3:5526133..5534811
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AA seq
801 aa
AA seq
DB search
MTREATMKKKKNNAKKSCGFETMNLCPNVFRGIKRKGYQVPTPIQRKTMPLILSGADVVA
MARTGSGKTAAFLLPMLHRLNQHLPQGGVRGLILSPTRDLALQTLKFTQELGRFTDLRVS
LLVGGDSMEAQFEELAQSPDIIIATPGRLMHHLSEVDDMSLRTVEYVVFDEADCLFGMGF
AEQLHKILAQLGENRQTLLFSATLPSALAEFAKAGLRDPQLVRLDLETRISPDLKLAFFT
LRQEEKNAVLLYLIREHIRSDEQTLIFVSTKHHVEFLNMLFRAEGIEPSVCYGDMDQDAR
KIHVSRFRSRKTMLLIVTDIAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGT
AYSFVTTEDMAYLLDLHLFLSKPVKAAPTEEEFFQDMDGVRSRNDQALANGVTIYGRLPQ
KIIDLVSDRVREVIDNSAELELLQRTCKNAFRLYTKTKPLPSKESIRRVKDLPCEGLHPI
FYNVLETGELMALAFSENLKKFRGKQTILETEGEAAKSKHRKGPSGQWVDVMKRKRAIHE
NIINLVREQNSKKNMEKEEEEVESEITPLGKGRKATSGLKRKAESFKDDENYISSIPKNQ
HMEAGLSVKANEDFGSNRLEAAVLDLVADDGSGIQKQRSQYHWDKRGKKYIKLNNNDRVA
ANGKIKTESGAKTNATKTGIYKKWKERSHNKVSLRGTNTDGEAHGSSSFSGSFRGGRRNL
RGDGKRPHSMPNANVRSEIKDMDQIRKERQNKASRIAHMKTKSPKGRGKGKDKGGKGMGG
KGKGMGGKGKNPGRNGKRKAK
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtgaagcgaccatgaagaagaagaagaacaacgctaagaaatcatgtggattc
gaaacaatgaatctgtgtcccaacgtgttcagaggaatcaagcgcaaaggctaccaagtt
ccaactccaattcagcggaaaaccatgcccctcatcctctccggcgccgacgttgttgcc
atggctcgtactggttccggcaaaacggcggcgtttctgcttcctatgcttcaccggctc
aaccagcatcttcctcagggtggtgttagaggactcattttgtcgcctactagggatttg
gcgcttcaaactctcaagtttactcaggagcttggacggttcactgaccttcgtgtaagt
ttgttagttggaggtgatagtatggaagctcagtttgaggagttagctcagagtccggat
attataattgccactcctggtaggcttatgcaccatttgtctgaggtggatgatatgagc
ttgcgtaccgtggagtatgttgtttttgacgaggctgattgtttatttggaatgggtttt
gcggagcagttgcacaagattcttgctcagcttggtgagaaccgtcagaccttgcttttc
agtgctacattacccagtgcacttgctgaatttgccaaggctggtttgcgagaccctcag
cttgtcaggctggacttggagactagaattagccctgacttgaagcttgccttcttcact
ttgaggcaggaagagaagaatgctgtgttgctctatttgatcagggagcatattcgttct
gatgagcagacattgatttttgtgtccacgaaacaccatgtggagtttctcaacatgttg
ttccgggcagagggtattgagccctctgtatgttatggcgacatggatcaagatgctcgc
aaaatccatgtatcaaggtttaggtcaagaaagacaatgttgttgattgtgacagatatt
gcagctcgaggcattgatattccactccttgataatgttatcaattgggactttcctcca
aagcctaaaatatttgtccatcgagttggaagggctgcaagggctggtcgtactggtaca
gcgtattcttttgtgactacagaggatatggcctaccttttggatcttcatttgttcctc
tcaaaaccagtcaaagctgctcccaccgaagaagagttctttcaggatatggatggagta
aggtcaagaaatgatcaggcactggctaatggagtaaccatttatggtcgtttgccccaa
aagatcattgaccttgtttcagacagagttagggaagtgattgataattctgcagaactg
gaactactgcagagaacctgtaaaaatgcatttcgtttatatacaaagacaaaaccctta
ccctcgaaggagtccattagaagagtgaaggatttgccctgtgagggattgcatccaatt
ttctataatgtgttggaaacaggggagttaatggctcttgcattttctgagaatttgaaa
aagtttaggggaaagcaaaccattttggaaactgaaggggaagcagctaaatcaaagcat
cgaaaggggccttctggccaatgggttgatgtgatgaaaaggaaaagagccattcatgag
aatattataaatttggttcgtgaacagaattctaagaaaaatatggagaaggaggaggag
gaagttgaatcagaaatcactcctttggggaaaggaagaaaagcaacaagtggtcttaag
agaaaggccgaaagtttcaaggatgatgaaaactatataagttcaatacctaaaaatcaa
cacatggaggcaggcctttcggtaaaagctaatgaagactttggttcaaatagattggaa
gcagctgtcctagatctggttgcagatgatggttctggcattcagaaacaaagatctcaa
tatcactgggataagaggggtaaaaagtacatcaagttaaacaataatgaccgtgttgct
gcaaatggaaagataaagacagagagtggtgcaaaaacgaatgccaccaagactggtata
tataaaaagtggaaagaacgctcacacaataaggtatctcttagagggaccaatactgat
ggtgaagctcatgggtcctcaagtttctcaggatctttccggggaggtcgcagaaatctt
agaggcgacggcaagaggccgcattctatgcctaatgctaatgtgcgttcagaaatcaaa
gatatggatcaaattcgaaaggagaggcagaacaaggctagcagaattgctcatatgaag
accaaatcacccaagggtaggggtaagggtaaggataaggggggtaagggtatggggggt
aagggtaagggtatggggggtaagggtaaaaaccctggcagaaatggaaagagaaaagcc
aaatag
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