Lotus japonicus: 130745213
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Entry
130745213 CDS
T04348
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1-like
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
lja
Lotus japonicus
Pathway
lja03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130745213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lja03009
]
130745213
03016 Transfer RNA biogenesis [BR:
lja03016
]
130745213
03029 Mitochondrial biogenesis [BR:
lja03029
]
130745213
Enzymes [BR:
lja01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
130745213
Ribosome biogenesis [BR:
lja03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
130745213
Transfer RNA biogenesis [BR:
lja03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
130745213
Mitochondrial biogenesis [BR:
lja03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
130745213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POPLD
POP1_N
POP1_C
Motif
Other DBs
NCBI-GeneID:
130745213
NCBI-ProteinID:
XP_057453353
LinkDB
All DBs
Position
3:complement(63067258..63074587)
Genome browser
AA seq
883 aa
AA seq
DB search
MVTEGTRKPQGSVPIPPRKINVQKYAKSRGPELLSLQSIVENRLNNNYSSQRNKRRRTTA
FDSQIARKGGNRKRQKLGAVDKAHDESVLEKDRLKKLPRRIRRRYELKMNPENGFCTSGD
GTKRLRTHVWHAKRFTMTKLWGYNLPLGFQGRGKGSRAILKRFKEGVLLHDASYFTAVQL
EGPEDSLVSVLRMVLVPSLETATPGDHDFSVLSGTTYGTAMLYQVEAPVSLPIAPVTYIW
RPTFPQNKSTELDGRNHHTSSSQHDINDDSSNHDADLCEKSDGMKCGSSFRHIWVWIHAS
AFEEGYDSLKFACQKEMEKSGVLINCLSLEGQLAKLELMGSQTFNLLQKILHPVRSISEN
HWQLKKHVAIEEDSVSPSIKSSILNCEEHFSSHAMLSFNVTDPRELLGRRTITPTEPIST
EVRSDAQETNDNELANFGGKFEKNTGLSSLSWSKHVDNQSNVDDLWYASTTGLRPPVEDS
VLSKEKHCERMVNFCLDDKESGEANSSTKVRCSRSCPIVLLKNDMKDLIIGWSIILPLSW
VKAFWIPLISNGAHAIGLREKHWIACEIELPSFPSDFPDCKAYSCEMAAKDAVFNKKEEL
RQPSVRHFKVPIVPPWGIVRTTFNKEISAMDTLDLSTREDLTSANSLPISCSGSSKISNF
NCVNNSFDGTIARTGNMLTTFINETKAGQLLLFPHVAEGKDKISKFIKGEQNLDLMHKSS
CIYDHKLCFLRVILHPFKEGFFEEGAVICAPCPSDISIWTSSSEKSEKDLQLSQSAMRLY
FKEHSSGNWGMQIPEDSIARASHRWPIGFVTTASVQGSKRLVAEGFCEAVLLSHLREEQW
KELPVKQRRREIYVLVRNLRSVAYRLALASVVLENQENDVEFF
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggttactgaaggaaccagaaagcctcaaggttcagtaccaataccacctcgcaaaatc
aatgtgcagaaatatgctaaatcacgtggcccggagctcctgagccttcaatctatcgta
gaaaatagattaaacaacaactatagctctcaaaggaacaagagaagaagaacaactgca
tttgatagccaaattgcaagaaaggggggcaacagaaagaggcagaaactgggagcagtt
gataaagcccatgatgaatcagttttggagaaggaccggttaaagaagcttcctcggcgt
attcgacggagatatgaacttaaaatgaacccagagaatggtttttgcacttctggggat
ggaaccaagagactgagaactcatgtttggcatgcaaagcggtttaccatgacgaagctg
tggggttacaaccttcctctgggttttcaaggaagagggaaaggttcaagggcaatcttg
aaaagattcaaagaaggtgtgcttttgcatgatgctagctattttactgctgtccaattg
gagggtccagaggattcgttagtttcagtattaagaatggtactggtgccttctctggaa
acagcaacgcctggggatcatgatttctctgttctttctggtacaacctatggaactgca
atgctttatcaagttgaagcaccagtttctctgccaattgctcctgtgacctatatatgg
cgacctactttccctcaaaataagagtactgagctagatggcagaaatcatcatacttct
tcaagtcaacatgatatcaatgatgactcaagtaatcatgatgctgatttatgtgaaaaa
tcagatgggatgaagtgtggttcttcatttagacacatttgggtctggatacatgcttct
gcatttgaagaaggatatgatagtctaaaatttgcctgtcagaaagagatggaaaagagc
ggcgtcctaattaattgcttatcacttgagggccaacttgccaaattagaattgatggga
tcacagacatttaatcttcttcagaagatattgcatcctgtccgcagtatttcagagaat
cattggcagttaaagaaacatgtggctatagaagaagactctgtttctccgagtataaag
tcatccatactgaattgtgaggagcatttttcttctcatgctatgttatcttttaacgtt
acggatcctcgagaacttctggggagaaggactattactccaacagaaccaatttcaact
gaagtacggagtgatgctcaagaaactaatgacaacgagcttgctaattttggaggaaag
tttgagaagaatacaggcttatcttcattatcatggtcaaaacatgtagacaaccagtct
aatgtcgatgatctatggtatgcttccaccacagggttaaggcccccagtggaagacagt
gtcctttctaaagagaaacactgtgagcgcatggttaatttctgccttgatgataaagag
tctggggaggcgaactcctcaaccaaggtgcggtgctcaagatcttgccctattgtgctt
ttaaaaaatgatatgaaggatttgattataggatggtccattatacttcccctaagttgg
gtcaaagccttctggattcctcttatttctaatggggcacatgcaataggtttgcgagag
aagcactggattgcgtgtgaaatagagctaccatctttcccttcagatttcccagattgc
aaggcatactcatgcgaaatggcagctaaagatgctgtatttaataaaaaagaagaacta
cgtcaaccttccgtgaggcattttaaagttcccatcgtgccaccttggggcattgttcgc
actactttcaacaaagaaattagtgcgatggacactcttgatctttcgactagggaagat
ttgaccagtgctaattcattgccaatctcttgctcaggaagctctaaaatttcaaatttt
aactgtgtgaataattcatttgatggaactatagcaagaacaggtaatatgctgactact
ttcatcaatgaaaccaaagctggtcaattgctattgtttccgcatgtagcagaaggaaag
gacaaaatctccaagttcattaagggagaacaaaatctggatctcatgcataagagctct
tgcatttatgaccataagctatgttttctaagagttattcttcacccattcaaggaaggc
ttttttgaagagggagcagttatctgtgcgccatgtccttctgatatatctatatggact
tcaagttcagagaaaagcgaaaaagatcttcaactgtcccagtctgctatgagattatac
ttcaaagagcattcctctggtaattggggaatgcagataccagaggattcaattgccaga
gcgtctcaccgatggcctattggctttgtcacaacagcttcagttcaaggaagcaagagg
ctagtagcagagggattttgcgaggcagttttactgtctcatttaagagaggaacagtgg
aaggagttgcctgtgaaacaaaggaggagggaaatatatgtacttgtccggaatttacga
tccgtagcatatagacttgctctagcttctgttgttctggaaaatcaagaaaatgacgtt
gagttcttttaa
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