Lotus japonicus: 130745225
Help
Entry
130745225 CDS
T04348
Name
(RefSeq) vacuolar protein sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
lja
Lotus japonicus
Pathway
lja04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130745225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130745225
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lja04147
]
130745225
Membrane trafficking [BR:
lja04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
130745225
Exosome [BR:
lja04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130745225
Exosomal proteins of colorectal cancer cells
130745225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
MKT1_C
Motif
Other DBs
NCBI-GeneID:
130745225
NCBI-ProteinID:
XP_057453372
LinkDB
All DBs
Position
3:complement(63247387..63252976)
Genome browser
AA seq
447 aa
AA seq
DB search
MAGNCLPAVKLTGSGRPVLLPNEIECFFLSGVDLLCEDEPNSWFPHLKSGLLILTTHRLL
WLPEPADGGTSSAVHLAAISHIFPHKKSLKSVFASPRVRFQVSPSPEGGVAASGSRSVVA
TIVVRGKGEFDAFVAKFWENWRARAWEEAESGQSSGANVAATAATSSSSGGIYGRDGTVR
MVGVSGILRKEQEMWESTDKSLQDAFQDLNALMSKAKEMVMLAEKMRQKLLSGSNSQTNA
TNEEEMGTKEEMQDWLLSVGIISPVTKESAGAMYHQQLSRQLADFVKVPLERAGGIINLI
DIYCLFNRARGTELISPDDLLQACSLWEKFDVPVVLRKFDRGVMVIQTKSHSDEEVFAKI
KVLVMKPDALRAGISASDAAMTLAVAPAMAKEHLLSAESKGILCRDISPDGFRFYINLFP
EIDRDDMHVVKDQGIYASWVSANHAHG
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggccggaaactgcttaccggcggtgaagctcaccggaagtggccggccggtactatta
ccgaacgagatcgagtgcttcttcctctccggcgtcgaccttctctgcgaagacgaaccc
aactcctggttccctcacctcaaatccggcctcctcatcctcaccacccaccgcctcctc
tggctccccgaacccgccgacggcggcacttcctccgctgtccacctcgccgcgatctcc
cacatcttccctcacaagaagtccctcaagtccgtcttcgcctcgcctagggtccgtttc
caggtttcgccgtcgccggagggcggagttgctgcatcggggtcgaggtctgtggtggcc
actattgtggtgagggggaagggggaattcgacgcgtttgtggctaagttttgggagaat
tggcgcgccagggcgtgggaggaggcggagagtggtcagagttcgggggcgaatgtggcg
gcgacggcggcaacgtcatcgtcgtcgggtgggatttatgggagggacgggacggtgagg
atggtgggagtgtcggggatattgaggaaggagcaggaaatgtgggagagtactgataag
agcttgcaggatgcttttcaggatttgaatgctctcatgagcaaggctaaagaaatggtg
atgctagcagagaaaatgaggcaaaaacttttgtctggctcaaattctcaaaccaatgca
actaatgaggaggagatgggtacaaaggaagagatgcaagattggttattgagcgttggt
ataatatcccctgttaccaaagagtctgcgggtgctatgtatcatcagcagttatctcgt
cagttggcagattttgttaaagttccacttgagagagctggaggaattatcaatcttatt
gatatttattgtctcttcaatcgtgctcgtggcacagaattgatctcacctgatgatttg
ttgcaagcatgctctttgtgggaaaagtttgatgtcccagtcgttctacggaagtttgat
agaggagtcatggtaatacagactaagtcccacagtgatgaggaggttttcgctaaaatc
aaggtgcttgttatgaagcctgatgctctccgagctggaataagtgctagtgacgctgca
atgacactggcagttgccccagcaatggcaaaggaacatctcttgtctgctgagagcaag
ggtatactgtgcagagatataagccctgatggatttcgcttttatattaatttgttccct
gaaatcgatcgagatgatatgcatgtagtgaaagatcaagggatttatgcctcctgggta
agtgcaaaccatgctcatggttag
DBGET
integrated database retrieval system
