Lotus japonicus: 130745590
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Entry
130745590 CDS
T04348
Name
(RefSeq) DNA mismatch repair protein MLH1
KO
K08734
DNA mismatch repair protein MLH1
Organism
lja
Lotus japonicus
Pathway
lja03430
Mismatch repair
lja03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
130745590
03460 Fanconi anemia pathway
130745590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lja03400
]
130745590
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
130745590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
130745590
NCBI-ProteinID:
XP_057453907
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All DBs
Position
3:70548486..70560253
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AA seq
728 aa
AA seq
DB search
MEERASGSEKEMEPPKIQRLSESVVNRIAAGEVIQRPVSAVKELLENSLDAGSTSINLLI
KDGGLKLIQVSDDGHGVRFEDLPILCERHTTSKLSAFEDLQSIKSMGFRGEALASMTYVG
HVTVTTITKGKLHGYRVSYRDGVMEHEPKPCAAVKGTQIMVENLFYNMAARRKTLQSSSD
DYSKIVDLVSRFAIHHTNVGFSCRKHGAVKADVHTVSTSSRLDAIRSVYGVSVARNLVEI
EASDNDPSTSCFEMHGYISNANHAAKKITMVLFINDRLVEWSALKRAVEIVYAATLPKAS
KPFIYISIVLPPENIDVNVHPTKREVSVLNQEVIIEKIQSVVESTMRSSNEARTFQEQTA
GQSSLSLINASKEVKHSPTPTGSRSQKVPVHKLVRTDSLDPAGRLHAYMQTMPDSNLEKN
INLNAVRSSVRQRRNPKDSTKLTSLDQLRDEINSNCDPGMMDIVRHCTYVGMADDIFALL
QHNTHLYLANVVNLSKELMYQQVLSRFAHFNAIQLSDPVPLKDLIILALKEEDLDSECND
DDEFKEKIAEMNTELLKQKVEMLEEYFGIHIDEHGNISRLPVILDQYTPDMDRIPEFALS
LGNDVDWEDEKNCIQAVSAALGNFYAMHPPMLPNPSGEGLSFYKKRKLIDSCAEENTCDI
TGNDVDDQVEHELLSEAETAWAQREWSIQHVLFPSMRLFFKPPVSMASNGTIVQVASLDK
LYKIFERC
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcgcgccagtgggagcgagaaggaaatggaaccacccaaaatccagcgcctg
agcgagtcggtggtgaaccgaatcgccgccggcgaggtcatccaacgcccagtctccgcc
gtcaaggagctcttggagaacagcctcgacgccggctccacctccatcaacctcctcatc
aaagacggtggtctcaaactcatccaagtctccgacgacggccacggagttcgattcgag
gatcttccgatactgtgcgagcgccacacgacatcgaagctgtctgcgtttgaggatttg
cagagcatcaagtccatggggtttaggggagaagctctcgccagcatgacctatgtcggc
cacgttactgtcaccaccatcaccaaaggcaaattgcacggttacagggtatcctataga
gatggtgtcatggagcatgaacccaagccatgtgctgctgtgaaaggaacacagataatg
gttgagaatctattctataacatggcggcgaggaggaagacgctgcaaagttcctctgat
gattactcaaagattgtggacttggtgagccggtttgctattcatcataccaatgttggt
ttctcttgcagaaagcatggagctgtgaaagcggatgttcacacagtttccacatcttcg
aggcttgatgccatcagatcagtttatggggtctcagttgctcgcaatctggttgaaatt
gaagcttcagacaatgatccatctacttcatgttttgagatgcatggttatatatccaat
gcaaatcatgcagccaagaaaattacaatggtgcttttcatcaatgatagattggttgag
tggtctgcattgaagagagctgttgaaattgtttatgcagcaacattacccaaagcatct
aaaccctttatatatatttcaattgttttaccgcctgagaatattgatgtaaatgtgcat
ccgacaaagagagaggttagtgttttaaatcaggaagttatcattgagaagatacagtcg
gtggttgaatcaacaatgaggagttccaatgaggcacggacatttcaagaacaaacagct
gggcaatcttcattgtctcttattaatgcaagcaaggaggttaaacatagccctacacca
acgggctcaagatcacagaaagtaccagttcataaattggttagaacagattcattagat
cctgcaggaagattacatgcctacatgcaaactatgcctgatagcaatcttgagaagaat
attaatttgaatgcagtaaggtcctcagttagacaaagaaggaacccaaaagattctacg
aaactcaccagccttgaccaacttcgtgatgagatcaatagcaattgtgaccctggcatg
atggacattgtaaggcattgcacatatgttggaatggcagatgatattttcgctttgctt
cagcacaatactcatctttatcttgcgaatgttgtaaacttgagcaaagagcttatgtat
cagcaagttctgagccgttttgcccatttcaacgccattcaacttagtgatccagtcccc
ttgaaagacttgataatattggcacttaaggaagaggatttagattcagaatgtaatgat
gatgacgaatttaaggagaagattgcagaaatgaacacagaactgctgaaacagaaggtt
gaaatgctggaggagtattttggcattcatattgatgaacatggaaatatctctagactt
ccggtgatacttgaccaatatactcctgacatggatcgcatccctgagtttgcgcttagt
ttaggcaatgatgttgattgggaagatgagaaaaactgtattcaagccgtttcagctgct
ctgggaaatttttatgctatgcatccacctatgttgcctaatccatctggtgagggcttg
tctttttacaagaagagaaaactgattgacagttgtgctgaggagaatacttgtgatatt
acagggaatgatgttgatgatcaagttgagcatgaattgctttctgaagctgagacagct
tgggcccagcgtgaatggtcaatacagcatgtgctttttccatccatgagactttttttc
aaaccacctgtttctatggctagcaatggaaccattgttcaggtggcttcattggataaa
ctttacaagatttttgaaagatgctag
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