Lotus japonicus: 130745893
Help
Entry
130745893 CDS
T04348
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
lja
Lotus japonicus
Pathway
lja00040
Pentose and glucuronate interconversions
lja01100
Metabolic pathways
Module
lja_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130745893
Enzymes [BR:
lja01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
130745893
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
130745893
NCBI-ProteinID:
XP_057454301
LinkDB
All DBs
Position
1:complement(74233871..74237027)
Genome browser
AA seq
391 aa
AA seq
DB search
MKSLFSVIFVLLVAATPSLYARVTLNAGSSSFNIVNYGAKGDGKTDDSQAFEKAWHDMCS
ATEGTPTLLIPKGKSFMLQPMLFKGPCKINIELQGTLVAPKSVDAWKWPDNNRVGWIKFS
DINGLVIGGGGTFDGQGAAWWTKYPSASNRPSALQFLGCKNLALSATNHINSPRNHIIIS
TCSDSSISNIHINSPEGSPNTDGIDISRSSNILIKDSTIQSGDDCVAINNGCSYINITGI
TCGPGHGISVGSLGKDGKFETVEEVHVRNCIFQGIKNGARIKTWPGGSGYARKIRFEDII
LNGAKNPIIIDQNYKDYQRNGPAKAVKVSDITYRNITGTSLSEEAISLNCDPIGCTDIAC
PFDYRFTGLLDPLTSPPICKCILHVGIERVF
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcctattttctgtgatttttgtgttgcttgtagctgctacacctagcttgtat
gctagagtaacactcaatgcaggatctagcagcttcaatattgtaaactatggggcaaaa
ggggatgggaagactgatgattcacaagcttttgagaaagcatggcatgatatgtgtagt
gcaactgaaggcaccccaactcttctcatacccaagggaaaatcattcatgttacaacct
atgttattcaagggtccttgcaaaattaacattgagcttcagggcactctagttgcccct
aaaagtgttgatgcttggaaatggccagataataatagggtaggatggataaaattctca
gacataaatggtcttgttattggcggaggaggaacattcgatgggcaaggtgctgcatgg
tggaccaagtaccctagtgcctctaataggccaagtgcccttcagttccttggctgtaag
aatctagcacttagcgcgacgaatcacatcaacagtccaagaaatcacataatcataagt
acatgcagtgactctagcatttccaacattcatattaattccccggaggggagtcctaac
accgacgggattgatatctcaagatcatctaacatcctcattaaggattcaacgattcaa
agtggagacgattgcgttgccatcaataatggttgctcttacatcaacataactggtatt
acatgtggtcctggccatggcatcagtgttgggagccttgggaaagatggaaagtttgag
acagtagaagaggtacatgtgagaaattgcatcttccaaggaatcaaaaatggagctagg
atcaagacatggccgggaggatccgggtatgctagaaagataagatttgaagatattatt
ctcaatggagcaaagaaccctatcatcattgaccaaaattataaggattatcaacgtaat
ggtcctgcgaaggcagtgaaagtgagtgatatcacttaccgtaacatcacaggaacctca
ctttccgaggaggcaatctcactgaattgtgaccccattggctgcaccgacattgcatgc
ccttttgattatcgtttcactggacttttggatcccttgacatcaccacccatttgtaaa
tgcatcctacatgttggcattgagagggtgttttag
DBGET
integrated database retrieval system
