Lotus japonicus: 130745946
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Entry
130745946 CDS
T04348
Name
(RefSeq) DNA polymerase alpha catalytic subunit-like
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
lja
Lotus japonicus
Pathway
lja03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130745946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lja03032
]
130745946
Enzymes [BR:
lja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
130745946
DNA replication proteins [BR:
lja03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
130745946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
130745946
NCBI-ProteinID:
XP_057454382
LinkDB
All DBs
Position
3:complement(15696003..15708842)
Genome browser
AA seq
1540 aa
AA seq
DB search
MADDDGSRKRRPTRGPESTARSQALERLKARLGGGRRSDPAGPQIKLENPIYDTVPEDEY
NALVAKRREQAQDFIVDDDGLGYGDQGQEEDWSKAGYTLSSGDESDGGGEKAEKPKRKKD
PQIKRPSASSVSLSAAAAMIGAQRLSSMFTSSNFKKNRDEKASESIVDDVIAEFAPDEND
RLRRRKAQPNPSAYSPGESLRVKPCTTNSIRASPVSGNFSIDGGTAKPVRANESNGSELG
VELKFEEAAELNGNSENVQAQPETMQIDDFPSNEGLSEDKVVKDIEMEEKPALKKEVFTL
NAKISREEDPTLSAATAGWQAAKRSTGGGGEINGAVSKDGLSAEFNLEADGSLPFFILDA
HEEYYGANMGTVYLFGKVKTGDLYQSCCVVVKNMQRCVYAIPSRPLHYTDEIMNLEKDVQ
ESRISPADFHKKLQGSVSDIKNEIAKHLVDLNVSSFTMAPVKRKYAFERTEIPAGDNYVV
KINYPFKDSVLPVDLKGESFCALLGTHCSALELFLIKRKIKGPSWLQVSKFSTCSASQRV
SWCKFELTVDSPKDIRISSPSLKITCEMPPVVVTAINLKTILNEEQNINEIVSASVVCCN
MVKIDTPMLASEWKRPGKLTHFTVIRKLHGNIFPLGFNKEVTDRNTKAGSNIVCAESSER
ALLNRLMLELHKLDTDVLVGHNISGFDLDVLLHRSQACKVPSSMWSKLGRLNRSTMPKLD
RRKKTFGSGADPGIMSCIAGRLLCDTYLSSRDLLKEVSYSLTELAKTQLNKFRKEVAPHG
IPKMFQTAESLMELIEYGETDAWLSMELMFHLSILPLTRQLTNISGNLWGKTLQGARAQR
VEYLLLHAFHAKKYIVPDKFSNYAKETKLTKRRVTHGVDDGNIDEADIDDGNYHNNASEI
DHKKSKKASSYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSFDGSFP
RLPSSTITGILPELLENLVKRRKSVKTWMKTASGLKYQQFDIQQQALKLTANSMYGCLGF
SNSRFYAKPIAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLDDIVKAKAM
AGKVIQEVNKKYKCLEIDLDGLYKRMLLLKKKKYAAVKVQFKDGSTPYEVIERKGLDIVR
RDWSLLAKELGDFCLTQILSGGSCEDVVESIHSSLMKVQEEMRNGQVPLEKYVITKTLTK
DPEAYPDAKNQPHVLVAQRLKQQGYSSGCSVGDTIPYIICYEQGGSSGSAKGIAQRARHP
DELKQEKGTWLIDIDYYLSQQIHPVVSRLCASIQGTSPERLADCLGLDTSKFQHKSSEAS
SVDPTSSLMFAADDEERYQGCEPLVLSCPSCSGTIDCPPVFKSVCLSVNEKPSSSGTEES
DYNFWRKLCCPKCQENGVGRISPAMIANQVKMQAEKFVLMYYRGSLMCDDETCKHTTRSI
SLRLVGDSERGTVCPNYPRCNGRLYRKYTEADLYKQLSYFCHVFDTASCIEKLEEKSRIP
VEKELIKIRPIVDPVASTVQKMRDRCAYGWVKLEDLVISI
NT seq
4623 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgacgacggttcccggaagcgaaggcccaccagaggccccgaatccaccgcc
cgcagccaagccttagagcgcctcaaggcccgccttggcggcggccgcagatctgacccc
gccggaccccaaatcaagttagaaaaccctatctacgacaccgtccccgaagacgagtac
aacgctctcgtcgcgaagcgccgcgagcaagcgcaggatttcatcgtcgacgatgacggc
ctcgggtacggggatcaaggtcaggaagaggattggtccaaagcaggctacactctctca
tccggagacgaatccgatggcggtggcgagaaggcggaaaagccgaagcggaagaaggat
cctcagatcaaacggccttctgcttcttcagtgtcactctccgccgccgcagctatgatc
ggcgcgcagaggctgtcgtcgatgttcacttcctcgaatttcaagaagaatagggatgag
aaggctagtgagagcattgttgatgatgttattgcggagtttgcaccggatgagaatgat
aggctgaggcgaagaaaggcgcaaccgaatccgtcggcatactctcccggagaatctctt
agggttaagccatgtactactaattcaattagggcttctccggtgtctggtaatttctca
attgacggcggcaccgcgaaaccggttagggctaatgagagcaatggtagtgaattgggg
gtagagctaaagtttgaagaagcagctgaactgaatggaaattctgaaaatgttcaggcg
cagccggaaacgatgcaaattgatgattttcccagtaatgagggtttgagtgaggataaa
gtggtgaaggacattgagatggaagaaaaaccagctctgaaaaaagaggttttcactttg
aatgcgaaaatttcaagagaggaggatccgacattgagtgctgctaccgcgggttggcag
gcagcaaagaggagtaccggcggaggaggggagatcaatggtgctgtttcgaaggatggt
ttgtccgccgagtttaatttggaggcagatggatcgctgccatttttcatactagatgcc
catgaggagtattatggagccaatatgggaacggtttatttgttcgggaaggtgaaaaca
ggggatttgtatcagagttgctgtgttgttgtgaagaacatgcagagatgtgtctatgca
attccaagtcgtcctttgcattacactgatgagataatgaatcttgagaaagatgtccag
gagtctcgaatttctcctgcagatttccataaaaaactgcaaggttctgtatctgatata
aagaatgagatagcaaaacatctggtggatctgaatgtttcttcctttaccatggcgccg
gttaagagaaaatatgcatttgaacgaactgaaattccggctggtgataattatgttgtg
aaaataaattatccatttaaggattcagtacttccagtagacctcaaaggagaaagtttc
tgtgctcttctaggaactcattgcagcgcactcgagctttttttgattaaaaggaagata
aaagggccttcatggctacaggtttcaaaattttctacatgttcagcttctcaaagggtt
agctggtgcaaatttgaattgactgttgactctcctaaagacataaggatttcttcacct
tccttgaaaatcacttgcgagatgcctcctgttgttgtcacagcgataaacttgaaaacc
atcctaaatgaagagcagaacataaatgaaattgtatctgcatctgttgtctgttgcaat
atggtcaagatcgacactcctatgttggcttcagagtggaaaagacctggaaagctgacc
cattttactgttattcgtaaacttcatgggaatatatttcctctgggattcaataaggag
gttacagacagaaacacaaaagcggggtcaaatattgtgtgtgctgaaagcagtgaaaga
gctttgttaaatcgtctgatgttagaattacacaagttggatactgatgtccttgttgga
cataatatttctggattcgacctggatgtccttctccacagatcccaggcttgcaaagta
ccgagcagcatgtggtctaaactaggccgtctcaaccgttctacgatgcctaaacttgac
aggaggaagaaaacttttggttctggagctgatcctggtatcatgtcttgtattgctggt
cgacttctttgtgatacatatctgagttcccgtgatctattaaaggaggttagttattcc
ttaactgagcttgcaaaaacacagctgaacaagtttcggaaggaagttgctccacatgga
attccaaaaatgttccaaactgcagagtccctaatggagcttattgaatatggtgaaacg
gatgcatggttgtctatggaactcatgtttcatttgagtattcttccgctcacacgtcag
ctgactaatataagtggtaatctgtgggggaaaactcttcagggtgctcgtgcacaaaga
gtggagtatcttttgttgcatgccttccatgcaaagaaatacattgtgccagacaagttt
tcaaattacgcaaaagaaacaaaattgacaaaacgcagagtaactcatggtgttgatgat
ggcaacattgatgaagcagatattgatgatggaaactaccataacaatgcctccgaaatt
gatcataagaaaagcaagaaggcttcttcctatgccgggggactggttttagagccaaag
aagggtctttatgacaaatatatattgcttctggacttcaatagtctttatccttctatc
attcaggaatacaatatctgcttcacaactgttgaaagatcttttgatggatcttttcct
cgtctaccttctagtacaataactggaatcttgccagagttgctggaaaatctagttaaa
aggaggaaaagcgtaaagacatggatgaagactgcatctggtcttaaatatcagcaattt
gatattcagcagcaagcactgaagcttactgcaaacagtatgtatggatgcctgggattt
tccaattcaagattttatgcgaagccaatagctgagctcataaccctacaaggaagggag
atattgcagagtactgttgaccttgttcaaaataatttgaacttagaggtgatctatggg
gatactgattcaataatgatttacagtgggctagatgatattgtgaaagcaaaggcaatg
gctggaaaagttattcaagaggtcaataagaaatataaatgcttggaaattgatcttgat
ggtttgtacaagaggatgctccttcttaagaaaaagaaatatgctgctgtgaaggtgcag
tttaaagatggtagcaccccatatgaggttattgaacgtaaaggtcttgacattgttcgt
cgtgactggagcttattagctaaagaattgggagatttttgcttgactcaaattttgtcg
ggagggtcatgtgaagatgtggttgaatcgattcacagctctctcatgaaggtgcaagag
gagatgaggaacggtcaagtaccattggaaaaatatgtgatcacaaagacattgactaaa
gatcctgaagcttatcctgatgccaaaaaccaaccacatgttcttgtggcacaaagattg
aagcagcaaggttactcctctggttgctctgttggtgataccatcccttatataatttgc
tatgagcagggtggtagttcaggcagtgcaaagggtattgctcaacgtgccagacatcct
gacgaactaaaacaagaaaaggggacatggctaattgacattgattactatttatcacaa
cagattcatcctgtggtatcacgtctctgtgcatcaattcagggaacaagcccagaaaga
ctggctgattgtttagggcttgacacatcaaagtttcaacataaatcaagtgaagcttca
agtgttgatcctacaagctcactcatgtttgctgctgatgacgaggagaggtatcaggga
tgtgagccgttggtcttgtcatgccccagctgctctggtactattgactgcccacctgtg
tttaaatccgtttgtttgtcggtgaatgaaaagccatctagctcgggcacggaggaatct
gactacaatttttggcgtaagctgtgctgtcctaaatgccaagaaaatggtgttggtaga
atttctcctgcaatgatagccaatcaggtcaaaatgcaagcagagaagttcgttttaatg
tattatagaggttcattaatgtgcgatgacgagacgtgtaagcacacaacgcgaagtatc
agccttcggctggttggtgattctgagagaggaactgtttgtccaaattatcctcgctgc
aacgggcgtctctacagaaagtacactgaagcagacttgtacaagcaactctcatatttc
tgccatgtattcgatactgctagttgtatagaaaagttggaggaaaaatctaggatacca
gtagagaaagagttgatcaaaattaggccaatagttgacccagtagcatcaacagtacag
aagatgagggaccgttgtgcctatggttgggtgaagctggaggacttggtcatttcaatt
taa
DBGET
integrated database retrieval system
